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Package 414/419HostnameOS / ArchBUILDCHECKBUILD BIN
xcms 1.24.1
Colin A. Smith
Snapshot Date: 2011-03-30 23:22:56 -0700 (Wed, 30 Mar 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_7/madman/Rpacks/xcms
Last Changed Rev: 50377 / Revision: 54281
Last Changed Date: 2010-10-20 16:58:17 -0700 (Wed, 20 Oct 2010)
lamb2 Linux (openSUSE 11.2) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK [ OK ]
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: xcms
Version: 1.24.1
Command: E:\biocbld\bbs-2.7-bioc\R\bin\R.exe CMD INSTALL --build --library=xcms.buildbin-libdir xcms_1.24.1.tar.gz
StartedAt: 2011-03-31 09:13:16 -0700 (Thu, 31 Mar 2011)
EndedAt: 2011-03-31 09:14:13 -0700 (Thu, 31 Mar 2011)
EllapsedTime: 56.9 seconds
RetCode: 0
Status:  OK  
PackageFile: xcms_1.24.1.zip
PackageFileSize: 1.611 MiB

Command output

* installing *source* package 'xcms' ...
** libs
g++ -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O2 -Wall  -c obiwarp/mat.cpp -o obiwarp/mat.o
g++ -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O2 -Wall  -c obiwarp/vec.cpp -o obiwarp/vec.o
g++ -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O2 -Wall  -c obiwarp/xcms_dynprog.cpp -o obiwarp/xcms_dynprog.o
g++ -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O2 -Wall  -c obiwarp/xcms_lmat.cpp -o obiwarp/xcms_lmat.o
g++ -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O2 -Wall  -c obiwarp/xcms_obiwarp.cpp -o obiwarp/xcms_obiwarp.o
gcc -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O3 -Wall  -std=gnu99 -c fastMatch.c -o fastMatch.o
gcc -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O3 -Wall  -std=gnu99 -c mzClust_hclust.c -o mzClust_hclust.o
gcc -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O3 -Wall  -std=gnu99 -c mzROI.c -o mzROI.o
gcc -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O3 -Wall  -std=gnu99 -c netCDF.c -o netCDF.o
g++ -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O2 -Wall  -c ramp_base64.cpp -o ramp_base64.o
g++ -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O2 -Wall  -c ramp.cpp -o ramp.o
g++ -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O2 -Wall  -c rampR.cpp -o rampR.o
gcc -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O3 -Wall  -std=gnu99 -c util.c -o util.o
gcc -I"E:/biocbld/bbs-2.7-bioc/R/include" -I./win//i386 -D_MSC_VER -DWIN32_LEAN_AND_MEAN        -O3 -Wall  -std=gnu99 -c xcms.c -o xcms.o
g++ -shared -s -static-libgcc -o xcms.dll tmp.def obiwarp/mat.o obiwarp/vec.o obiwarp/xcms_dynprog.o obiwarp/xcms_lmat.o obiwarp/xcms_obiwarp.o fastMatch.o mzClust_hclust.o mzROI.o netCDF.o ramp_base64.o ramp.o rampR.o util.o xcms.o -L./win//i386 -lws2_32 -lnetcdf -lz -LE:/biocbld/bbs-2.7-bioc/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.7-bioc/meat/xcms.buildbin-libdir/xcms/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'xcms' as xcms_1.24.1.zip

* DONE (xcms)