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Package 368/389HostnameOS / ArchBUILDCHECKBUILD BIN
stepNorm 1.20.0
Yuanyuan Xiao
Snapshot Date: 2010-10-04 11:22:20 -0700 (Mon, 04 Oct 2010)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_6/madman/Rpacks/stepNorm
Last Changed Rev: 46401 / Revision: 49923
Last Changed Date: 2010-04-22 11:21:23 -0700 (Thu, 22 Apr 2010)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: stepNorm
Version: 1.20.0
Command: E:\biocbld\bbs-2.6-bioc\R\bin\R.exe CMD check --no-vignettes --timings stepNorm_1.20.0.tar.gz
StartedAt: 2010-10-04 20:24:07 -0700 (Mon, 04 Oct 2010)
EndedAt: 2010-10-04 20:27:06 -0700 (Mon, 04 Oct 2010)
EllapsedTime: 179.2 seconds
RetCode: 0
Status:  OK  
CheckDir: stepNorm.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.6-bioc/meat/stepNorm.Rcheck'
* using R version 2.11.1 (2010-05-31)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'stepNorm/DESCRIPTION' ... OK
* this is package 'stepNorm' version '1.20.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'stepNorm' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

stepNorm.Rcheck/00install.out:

* install options are ' --no-html'

* installing *source* package 'stepNorm' ...
** R
** inst
** preparing package for lazy loading
Loading required package: limma
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (stepNorm)

stepNorm.Rcheck/stepNorm-Ex.timings:

nameusersystemelapsed
calcAIC0.420.000.51
calcBIC0.250.000.27
fit2DWithin22.86 0.0622.92
fitWithin52.81 0.0252.93
maCompPlate20.020.010.03
makeStepList0.040.020.06
marrayFitClass0.210.000.20
seqWithinNorm0.650.010.67
stepWithinNorm58.92 0.0759.07
withinNorm0.050.010.07