xcms 1.21.6
Colin A. Smith
| Bioconductor Changelog | | Snapshot Date: 2009-12-07 11:32:00 -0800 (Mon, 07 Dec 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/xcms | | Last Changed Rev: 43393 / Revision: 43434 | | Last Changed Date: 2009-12-04 10:31:08 -0800 (Fri, 04 Dec 2009) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | [ OK ] |
| pitt | Mac OS X Tiger (10.4.11) / i386 | ERROR | skipped | skipped |
| pelham | Mac OS X Leopard (10.5.8) / i386 | ERROR | skipped | skipped |
* installing *source* package 'xcms' ...
** libs
making DLL ...
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include" -I./win -D_MSC_VER -DWIN32_LEAN_AND_MEAN -O2 -Wall -c obiwarp/mat.cpp -o obiwarp/mat.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include" -I./win -D_MSC_VER -DWIN32_LEAN_AND_MEAN -O2 -Wall -c obiwarp/vec.cpp -o obiwarp/vec.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include" -I./win -D_MSC_VER -DWIN32_LEAN_AND_MEAN -O2 -Wall -c obiwarp/xcms_dynprog.cpp -o obiwarp/xcms_dynprog.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include" -I./win -D_MSC_VER -DWIN32_LEAN_AND_MEAN -O2 -Wall -c obiwarp/xcms_lmat.cpp -o obiwarp/xcms_lmat.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include" -I./win -D_MSC_VER -DWIN32_LEAN_AND_MEAN -O2 -Wall -c obiwarp/xcms_obiwarp.cpp -o obiwarp/xcms_obiwarp.o
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include" -I./win -D_MSC_VER -DWIN32_LEAN_AND_MEAN -O3 -Wall -std=gnu99 -c mzClust_hclust.c -o mzClust_hclust.o
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include" -I./win -D_MSC_VER -DWIN32_LEAN_AND_MEAN -O3 -Wall -std=gnu99 -c mzROI.c -o mzROI.o
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include" -I./win -D_MSC_VER -DWIN32_LEAN_AND_MEAN -O3 -Wall -std=gnu99 -c netCDF.c -o netCDF.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include" -I./win -D_MSC_VER -DWIN32_LEAN_AND_MEAN -O2 -Wall -c ramp_base64.cpp -o ramp_base64.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include" -I./win -D_MSC_VER -DWIN32_LEAN_AND_MEAN -O2 -Wall -c ramp.cpp -o ramp.o
ramp.cpp:64:1: warning: "S_ISDIR" redefined
In file included from ramp.h:59,
from ramp.cpp:34:
c:\rtools\mingw\bin\../lib/gcc/mingw32/4.2.1-sjlj/../../../../include/sys/stat.h:68:1: warning: this is the location of the previous definition
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include" -I./win -D_MSC_VER -DWIN32_LEAN_AND_MEAN -O2 -Wall -c rampR.cpp -o rampR.o
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include" -I./win -D_MSC_VER -DWIN32_LEAN_AND_MEAN -O3 -Wall -std=gnu99 -c util.c -o util.o
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include" -I./win -D_MSC_VER -DWIN32_LEAN_AND_MEAN -O3 -Wall -std=gnu99 -c xcms.c -o xcms.o
g++ -shared -s -o xcms.dll tmp.def obiwarp/mat.o obiwarp/vec.o obiwarp/xcms_dynprog.o obiwarp/xcms_lmat.o obiwarp/xcms_obiwarp.o mzClust_hclust.o mzROI.o netCDF.o ramp_base64.o ramp.o rampR.o util.o xcms.o -L./win -lws2_32 -lnetcdf -lz -LE:/biocbld/bbs-2.6-bioc/R/bin -lR
... done
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** MD5 sums
packaged installation of 'xcms' as xcms_1.21.6.zip
* DONE (xcms)