stam 1.13.1
Claudio Lottaz
| Bioconductor Changelog | | Snapshot Date: 2009-12-07 11:32:00 -0800 (Mon, 07 Dec 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/stam | | Last Changed Rev: 41861 / Revision: 43434 | | Last Changed Date: 2009-09-22 14:33:37 -0700 (Tue, 22 Sep 2009) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | [ ERROR ] | skipped | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | ERROR | skipped | skipped |
| pitt | Mac OS X Tiger (10.4.11) / i386 | ERROR | skipped | skipped |
| pelham | Mac OS X Leopard (10.5.8) / i386 | ERROR | skipped | skipped |
* checking for file 'stam/DESCRIPTION' ... OK
* preparing 'stam':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* installing *source* package 'stam' ...
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.6-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c util.c -o util.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o stam.so util.o -L/home/biocbuild/bbs-2.6-bioc/R/lib -lR
** R
** data
** inst
** preparing package for lazy loading
Loading required package: AnnotationDbi
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: DBI
Loading required package: cluster
Loading required package: survival
Loading required package: splines
Loading required package: KEGG.db
** help
*** installing help indices
** building package indices ...
Welcome to Structured Analysis of Microarrays
* DONE (stam)
* creating vignettes ... ERROR
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: GO.db
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: pamr
Loading required package: cluster
Loading required package: survival
Loading required package: splines
Loading required package: annaffy
Loading required package: KEGG.db
Welcome to Structured Analysis of Microarrays
Loading required package: hu6800.db
Loading required package: org.Hs.eg.db
Error: processing vignette 'tr_2004_03.Rnw' failed with diagnostics:
chunk 4
Error in exists(x, env) : invalid first argument
Execution halted