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Package 319/319HostnameOS / ArchBUILDCHECKBUILD BIN
yaqcaffy 1.4.0
Laurent Gatto
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/yaqcaffy
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: yaqcaffy
Version: 1.4.0
Command: E:\biocbld\bbs-2.4-bioc\R\bin\R.exe CMD build yaqcaffy
StartedAt: 2009-10-20 15:16:16 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 15:17:44 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 88.3 seconds
RetCode: 0
Status: OK
PackageFile: yaqcaffy_1.4.0.tar.gz
PackageFileSize: 292.2 KiB

Command output

* checking for file 'yaqcaffy/DESCRIPTION' ... OK
* preparing 'yaqcaffy':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'yaqcaffy' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: affy
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: genefilter
Loading required package: gcrma
Loading required package: Biostrings
Loading required package: IRanges

Attaching package: 'IRanges'


	The following object(s) are masked from package:base :

	 cbind,
	 duplicated,
	 order,
	 pmax,
	 pmax.int,
	 pmin,
	 pmin.int,
	 rank,
	 rbind,
	 rep.int,
	 sapply,
	 sort,
	 table,
	 unique 

Creating a new generic function for "merge" in "yaqcaffy"
** help
*** installing help indices
 >>> Building/Updating help pages for package 'yaqcaffy'
     Formats: text html latex example chm 
  YAQCStats-accessor                text    html    latex           chm
  YAQCStats-class                   text    html    latex           chm
  getAllInt                         text    html    latex   example chm
  getBioProbes                      text    html    latex   example chm
  getOutliers                       text    html    latex   example chm
  getQCRatios                       text    html    latex   example chm
  getRatioProbes                    text    html    latex   example chm
  getSpikeProbes                    text    html    latex   example chm
  morespikes                        text    html    latex           chm
  reprodPlot                        text    html    latex   example chm
  yaqc-methods                      text    html    latex           chm
  yaqc.affy                         text    html    latex   example chm
  yaqc.plot                         text    html    latex   example chm
  yaqc.summary                      text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.4-bioc\meat\yaqcaffy\chm\yaqcaffy.chm





Compile time: 0 minutes, 2 seconds

15	Topics

60	Local links

0	Internet links

1	Graphic





Created e:\biocbld\bbs-2.4-bioc\meat\yaqcaffy\chm\yaqcaffy.chm, 30,639 bytes

Compression decreased file by 21,115 bytes.

** building package indices ...
** MD5 sums
* DONE (yaqcaffy)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'yaqcaffy_1.4.0.tar.gz'