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Package 85/294HostnameOS / ArchBUILDCHECKBUILD BIN
explorase 1.6.0
Michael Lawrence
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/explorase
Last Changed Rev: 38883 / Revision: 38965
Last Changed Date: 2009-04-16 07:05:17 -0700 (Thu, 16 Apr 2009)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  WARNINGS 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386 N O T   S U P P O R T E D
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: explorase
Version: 1.6.0
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD check --no-vignettes explorase_1.6.0.tar.gz
StartedAt: 2009-04-18 18:43:33 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 18:44:22 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 48.7 seconds
RetCode: 0
Status: OK
CheckDir: explorase.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/explorase.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'explorase/DESCRIPTION' ... OK
* this is package 'explorase' version '1.6.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'explorase' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
exp_loadDesign: no visible global function definition for 'pData'
exp_loadExpressionSet: no visible global function definition for
  'phenoData'
exp_loadExpressionSet: no visible global function definition for
  'featureData'
exp_loadExpressionSet: no visible global function definition for
  'exprs'
exp_loadInfo: no visible global function definition for 'pData'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating explorase-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating explorase-manual.tex ... OK
* checking explorase-manual.tex using pdflatex ... OK

explorase.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.3-bioc/meat/explorase.Rcheck


---------- Making package explorase ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  preparing package explorase for lazy loading
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'explorase'
     Formats: text html latex example chm 
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Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.3-bioc\meat\explorase.Rcheck\00_pkg_src\explorase\chm\explorase.chm


Compile time: 0 minutes, 0 seconds
42	Topics
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Created e:\biocbld\bbs-2.3-bioc\meat\explorase.Rcheck\00_pkg_src\explorase\chm\explorase.chm, 34,734 bytes
Compression decreased file by 46,038 bytes.
  adding MD5 sums

* DONE (explorase)