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Package 105/260HostnameOS / ArchBUILDCHECKBUILD BIN
goProfiles 1.2.0
Alex Sanchez
Snapshot Date: 2008-08-08 00:12:03 -0700 (Fri, 08 Aug 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/goProfiles
Last Changed Rev: 31430 / Revision: 33132
Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK [ OK ]
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: goProfiles
Version: 1.2.0
Command: /home/biocbuild/bbs-2.2-bioc/R/bin/R CMD check goProfiles_1.2.0.tar.gz
StartedAt: 2008-08-08 04:11:33 -0700 (Fri, 08 Aug 2008)
EndedAt: 2008-08-08 04:15:14 -0700 (Fri, 08 Aug 2008)
EllapsedTime: 221.7 seconds
RetCode: 0
Status: OK
CheckDir: goProfiles.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/home/biocbuild/bbs-2.2-bioc/meat/goProfiles.Rcheck'
* using R version 2.7.1 (2008-06-23)
* using session charset: ISO8859-1
* checking for file 'goProfiles/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'goProfiles' version '1.2.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'goProfiles' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating goProfiles-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating goProfiles-manual.tex ... OK
* checking goProfiles-manual.tex using pdflatex ... OK

goProfiles.Rcheck/00install.out:

* Installing *source* package 'goProfiles' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: GO.db
** help
 >>> Building/Updating help pages for package 'goProfiles'
     Formats: text html latex example 
  CD4ids                            text    html    latex   example
  GOTermsList                       text    html    latex   example
  basicProfile                      text    html    latex   example
  compSummary                       text    html    latex   example
  compareGOProfiles                 text    html    latex   example
  compareGeneLists                  text    html    latex   example
  compareProfilesLists              text    html    latex   example
  conversionFunctions               text    html    latex   example
  drosophila                        text    html    latex   example
  equivSummary                      text    html    latex   example
  equivalentGOProfiles              text    html    latex   example
  expandedLevel                     text    html    latex   example
  expandedProfile                   text    html    latex   example
  fitGOProfile                      text    html    latex   example
  goProfiles-package                text    html    latex
  hugoIds                           text    html    latex   example
  mergeProfilesLists                text    html    latex   example
  omimIds                           text    html    latex   example
  plotProfiles                      text    html    latex   example
  printProfiles                     text    html    latex   example
  prostateIds                       text    html    latex   example
  sampleProfiles                    text    html    latex   example
** building package indices ...
* DONE (goProfiles)