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Package 148/264HostnameOS / ArchBUILDCHECKBUILD BIN
mdqc 1.0.1
Gabriela Cohen-Freue
Snapshot Date: 2008-04-09 00:13:10 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/mdqc
Last Changed Rev: 30261 / Revision: 30951
Last Changed Date: 2008-02-28 11:11:54 -0800 (Thu, 28 Feb 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  ERROR 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  ERROR 
wellington Linux (openSUSE 10.3) / i686  OK  ERROR 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ WARNINGS ] OK 
pelham Mac OS X Leopard (10.5.1) / i386  OK  ERROR  OK 
Package: mdqc
Version: 1.0.1
Command: E:\biocbld\bbs-2.2-bioc\R\bin\R.exe CMD check mdqc_1.0.1.tar.gz
StartedAt: 2008-04-09 06:35:20 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 06:36:12 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 52.3 seconds
RetCode: 0
Status: WARNINGS
CheckDir: mdqc.Rcheck
Warnings: 1

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/mdqc.Rcheck'
* using R version 2.7.0 Under development (unstable) (2008-03-10 r44730)
* using session charset: ISO8859-1
* checking for file 'mdqc/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'mdqc' version '1.0.1'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'mdqc' can be installed ... WARNING
Found the following significant warnings:
       missing link(s):  pam
See 'E:/biocbld/bbs-2.2-bioc/meat/mdqc.Rcheck/00install.out' for details.
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating mdqc-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating mdqc-manual.tex ... OK
* checking mdqc-manual.tex using pdflatex ... OK

WARNING: There was 1 warning, see
  E:/biocbld/bbs-2.2-bioc/meat/mdqc.Rcheck/00check.log
for details

mdqc.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.2-bioc/meat/mdqc.Rcheck


---------- Making package mdqc ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'mdqc'
     Formats: text html latex example chm 
  allQC                             text    html    latex   example chm
  mdqc-package                      text    html    latex           chm
  mdqc                              text    html    latex   example chm
     missing link(s):  pam
  plot.mdqc                         text    html    latex   example chm
  prcomp.robust                     text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.2-bioc\meat\mdqc.Rcheck\00_pkg_src\mdqc\chm\mdqc.chm


Compile time: 0 minutes, 0 seconds
6	Topics
16	Local links
1	Internet link
1	Graphic


Created e:\biocbld\bbs-2.2-bioc\meat\mdqc.Rcheck\00_pkg_src\mdqc\chm\mdqc.chm, 28,895 bytes
Compression decreased file by 1,942 bytes.
  adding MD5 sums

* DONE (mdqc)