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Package 88/251HostnameOS / ArchBUILDCHECKBUILD BIN
GeneticsBase 1.3.1
Gregory Warnes
Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GeneticsBase
Last Changed Rev: 27963 / Revision: 29143
Last Changed Date: 2007-10-12 11:47:40 -0700 (Fri, 12 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64 [ OK ] OK  OK 
Package: GeneticsBase
Version: 1.3.1
Command: D:\biocbld\bbs-2.2-bioc\R\bin\R.exe CMD build GeneticsBase
StartedAt: 2007-12-11 04:18:46 -0700 (Tue, 11 Dec 2007)
EndedAt: 2007-12-11 04:20:05 -0700 (Tue, 11 Dec 2007)
EllapsedTime: 78.8 seconds
RetCode: 0
Status: OK
PackageFile: GeneticsBase_1.3.1.tar.gz
PackageFileSize: 1.488 MiB

Command output

* checking for file 'GeneticsBase/DESCRIPTION' ... OK
* preparing 'GeneticsBase':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.2-bioc/tmpdir/Rinst472879681


---------- Making package GeneticsBase ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making LdMax.d from LdMax.cpp
making convert.d from convert.cpp
making getLDdist.d from getLDdist.cpp
making readGenes.ped.d from readGenes.ped.cpp
making register.d from register.cpp
g++   -Id:/biocbld/bbs-2.2-bioc/R/include     -O2 -Wall  -c LdMax.cpp -o LdMax.o
g++   -Id:/biocbld/bbs-2.2-bioc/R/include     -O2 -Wall  -c convert.cpp -o convert.o
g++   -Id:/biocbld/bbs-2.2-bioc/R/include     -O2 -Wall  -c getLDdist.cpp -o getLDdist.o
g++   -Id:/biocbld/bbs-2.2-bioc/R/include     -O2 -Wall  -c readGenes.ped.cpp -o readGenes.ped.o
g++   -Id:/biocbld/bbs-2.2-bioc/R/include     -O2 -Wall  -c register.cpp -o register.o
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I d:/biocbld/bbs-2.2-bioc/R/include  -i GeneticsBase_res.rc -o GeneticsBase_res.o
g++   -shared -s  -o GeneticsBase.dll GeneticsBase.def LdMax.o convert.o getLDdist.o readGenes.ped.o register.o GeneticsBase_res.o  -Ld:/biocbld/bbs-2.2-bioc/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  preparing package GeneticsBase for lazy loading
Loading required package: combinat

Attaching package: 'combinat'


	The following object(s) are masked from package:utils :

	 combn 

Loading required package: xtable
Loading required package: mvtnorm
Loading required package: haplo.stats
  installing man source files
  installing indices
Loading required package: methods
Loading required package: combinat

Attaching package: 'combinat'


	The following object(s) are masked from package:utils :

	 combn 

Loading required package: xtable
Loading required package: mvtnorm
Loading required package: haplo.stats
  not zipping data
  installing help
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 >>> Building/Updating help pages for package 'GeneticsBase'
     Formats: text html latex example chm 
  ALZH                              text    html    latex   example chm
  Armitage                          text    html    latex   example chm
  CAMP                              text    html    latex   example chm
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Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.2-bioc\meat\GeneticsBase\chm\GeneticsBase.chm





Compile time: 0 minutes, 0 seconds

70	Topics

266	Local links

8	Internet links

1	Graphic





Created d:\biocbld\bbs-2.2-bioc\meat\GeneticsBase\chm\GeneticsBase.chm, 103,311 bytes

Compression decreased file by 191,321 bytes.

  adding MD5 sums

* DONE (GeneticsBase)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'GeneticsBase_1.3.1.tar.gz'