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BioC 2.14: BUILD BIN report for phyloseq on morelia

This page was generated on 2014-10-08 09:05:23 -0700 (Wed, 08 Oct 2014).

Package 582/824HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
phyloseq 1.8.2
Paul J. McMurdie
Snapshot Date: 2014-10-07 17:20:37 -0700 (Tue, 07 Oct 2014)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_14/madman/Rpacks/phyloseq
Last Changed Rev: 90687 / Revision: 95116
Last Changed Date: 2014-05-23 15:55:48 -0700 (Fri, 23 May 2014)
zin2 Linux (Ubuntu 12.04.4 LTS) / x86_64  NotNeeded  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  OK  OK 
petty Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  OK  OK 
morelia Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK [ OK ]

Summary

Package: phyloseq
Version: 1.8.2
Command: rm -rf phyloseq.buildbin-libdir && mkdir phyloseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh phyloseq_1.8.2.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R phyloseq.buildbin-libdir
StartedAt: 2014-10-08 03:04:34 -0700 (Wed, 08 Oct 2014)
EndedAt: 2014-10-08 03:05:06 -0700 (Wed, 08 Oct 2014)
EllapsedTime: 32.4 seconds
RetCode: 0
Status:  OK 
PackageFile: phyloseq_1.8.2.tgz
PackageFileSize: 3.091 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf phyloseq.buildbin-libdir && mkdir phyloseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh phyloseq_1.8.2.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R phyloseq.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=phyloseq.buildbin-libdir phyloseq_1.8.2.tar.gz'
>>>>>>> 

* installing *source* package ‘phyloseq’ ...
** R
** data
** inst
** preparing package for lazy loading
Note: the specification for S3 class “AsIs” in package ‘BiocGenerics’ seems equivalent to one from package ‘RJSONIO’: not turning on duplicate class definitions for this class.
Note: the specification for S3 class “connection” in package ‘BiocGenerics’ seems equivalent to one from package ‘RJSONIO’: not turning on duplicate class definitions for this class.
Note: the specification for S3 class “file” in package ‘BiocGenerics’ seems equivalent to one from package ‘RJSONIO’: not turning on duplicate class definitions for this class.
Note: the specification for S3 class “pipe” in package ‘BiocGenerics’ seems equivalent to one from package ‘RJSONIO’: not turning on duplicate class definitions for this class.
Note: the specification for S3 class “textConnection” in package ‘BiocGenerics’ seems equivalent to one from package ‘RJSONIO’: not turning on duplicate class definitions for this class.
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Note: the specification for S3 class “AsIs” in package ‘BiocGenerics’ seems equivalent to one from package ‘RJSONIO’: not turning on duplicate class definitions for this class.
Note: the specification for S3 class “connection” in package ‘BiocGenerics’ seems equivalent to one from package ‘RJSONIO’: not turning on duplicate class definitions for this class.
Note: the specification for S3 class “file” in package ‘BiocGenerics’ seems equivalent to one from package ‘RJSONIO’: not turning on duplicate class definitions for this class.
Note: the specification for S3 class “pipe” in package ‘BiocGenerics’ seems equivalent to one from package ‘RJSONIO’: not turning on duplicate class definitions for this class.
Note: the specification for S3 class “textConnection” in package ‘BiocGenerics’ seems equivalent to one from package ‘RJSONIO’: not turning on duplicate class definitions for this class.
* DONE (phyloseq)