ncdfFlow 2.10.30
Mike Jiang
| Snapshot Date: 2014-10-07 17:20:37 -0700 (Tue, 07 Oct 2014) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_14/madman/Rpacks/ncdfFlow | | Last Changed Rev: 91062 / Revision: 95116 | | Last Changed Date: 2014-06-06 13:24:57 -0700 (Fri, 06 Jun 2014) |
| zin2 | Linux (Ubuntu 12.04.4 LTS) / x86_64 | OK | OK | OK | |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | [ OK ] | OK | OK | OK |
| petty | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | OK | OK | OK |
| morelia | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | OK | OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://zin2/BBS/2.14/bioc/src/contrib/ncdfFlow_2.10.30.tar.gz && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch ncdfFlow_2.10.30.tar.gz && rm ncdfFlow_2.10.30.tar.gz
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install for i386
* installing to library 'E:/biocbld/bbs-2.14-bioc/R/library'
* installing *source* package 'ncdfFlow' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
cp includeWin/i386/* includeWin/
cp libwin/i386/*.dll .
gcc -m32 -I"E:/biocbld/BBS-2˜1.14-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -IincludeWin -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c bitOps.c -o bitOps.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.14-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -IincludeWin -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c hdfFlow.c -o hdfFlow.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.14-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -IincludeWin -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c init.c -o init.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.14-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -IincludeWin -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c wrappers.c -o wrappers.o
wrappers.c: In function 'readSlice':
wrappers.c:535:12: warning: unused variable 'data_out' [-Wunused-variable]
gcc -m32 -shared -s -static-libgcc -o ncdfFlow.dll tmp.def bitOps.o hdfFlow.o init.o wrappers.o -L. -llibhdf5ForBioC-7 -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.14-/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.14-bioc/R/library/ncdfFlow/libs/i386
** R
** inst
** preparing package for lazy loading
Creating a generic function for 'lapply' from package 'base' in package 'ncdfFlow'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing to library 'E:/biocbld/bbs-2.14-bioc/R/library'
* installing *source* package 'ncdfFlow' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
cp includeWin/x64/* includeWin/
cp libwin/x64/*.dll .
gcc -m64 -I"E:/biocbld/BBS-2˜1.14-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -IincludeWin -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c bitOps.c -o bitOps.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.14-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -IincludeWin -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c hdfFlow.c -o hdfFlow.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.14-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -IincludeWin -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c init.c -o init.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.14-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -IincludeWin -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c wrappers.c -o wrappers.o
wrappers.c: In function 'readSlice':
wrappers.c:535:12: warning: unused variable 'data_out' [-Wunused-variable]
gcc -m64 -shared -s -static-libgcc -o ncdfFlow.dll tmp.def bitOps.o hdfFlow.o init.o wrappers.o -L. -llibhdf5ForBioC-7 -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.14-/R/bin/x64 -lR
installing to E:/biocbld/bbs-2.14-bioc/R/library/ncdfFlow/libs/x64
** testing if installed package can be loaded
* DONE (ncdfFlow)