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BioC 2.14: BUILD BIN report for methylumi on morelia

This page was generated on 2014-10-08 09:03:58 -0700 (Wed, 08 Oct 2014).

Package 490/824HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
methylumi 2.10.0
Sean Davis
Snapshot Date: 2014-10-07 17:20:37 -0700 (Tue, 07 Oct 2014)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_14/madman/Rpacks/methylumi
Last Changed Rev: 88838 / Revision: 95116
Last Changed Date: 2014-04-11 14:07:21 -0700 (Fri, 11 Apr 2014)
zin2 Linux (Ubuntu 12.04.4 LTS) / x86_64  OK  OK  WARNINGS 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  WARNINGS  OK 
petty Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  WARNINGS  OK 
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS [ OK ]

Summary

Package: methylumi
Version: 2.10.0
Command: rm -rf methylumi.buildbin-libdir && mkdir methylumi.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh methylumi_2.10.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R methylumi.buildbin-libdir
StartedAt: 2014-10-08 03:01:17 -0700 (Wed, 08 Oct 2014)
EndedAt: 2014-10-08 03:01:43 -0700 (Wed, 08 Oct 2014)
EllapsedTime: 25.8 seconds
RetCode: 0
Status:  OK 
PackageFile: methylumi_2.10.0.tgz
PackageFileSize: 4.01 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf methylumi.buildbin-libdir && mkdir methylumi.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh methylumi_2.10.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R methylumi.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=methylumi.buildbin-libdir methylumi_2.10.0.tar.gz'
>>>>>>> 

* installing *source* package ‘methylumi’ ...
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import by ‘graphics::image’ when loading ‘methylumi’
in method for ‘total.intensity’ with signature ‘object="MethyLumiSet"’: no definition for class “MethyLumiSet”
in method for ‘total.intensity’ with signature ‘object="MethyLumiM"’: no definition for class “MethyLumiM”
in method for ‘intensitiesByChannel’ with signature ‘object="MethyLumiSet"’: no definition for class “MethyLumiSet”
in method for ‘intensitiesByChannel’ with signature ‘object="MethyLumiM"’: no definition for class “MethyLumiM”
in method for ‘Cy3.SD’ with signature ‘object="MethyLumiSet"’: no definition for class “MethyLumiSet”
in method for ‘Cy3.N’ with signature ‘object="MethyLumiSet"’: no definition for class “MethyLumiSet”
in method for ‘Cy5.SD’ with signature ‘object="MethyLumiSet"’: no definition for class “MethyLumiSet”
in method for ‘Cy5.N’ with signature ‘object="MethyLumiSet"’: no definition for class “MethyLumiSet”
in method for ‘negctls’ with signature ‘object="MethyLumiSet",channel="character"’: no definition for class “MethyLumiSet”
in method for ‘negctls’ with signature ‘object="MethyLumiSet",channel="missing"’: no definition for class “MethyLumiSet”
in method for ‘negctls’ with signature ‘object="MethyLumiM",channel="character"’: no definition for class “MethyLumiM”
in method for ‘negctls’ with signature ‘object="MethyLumiM",channel="missing"’: no definition for class “MethyLumiM”
in method for ‘negctls.SD’ with signature ‘object="MethyLumiSet",channel="character"’: no definition for class “MethyLumiSet”
in method for ‘negctls.SD’ with signature ‘object="MethyLumiM",channel="character"’: no definition for class “MethyLumiM”
in method for ‘negctls.stderr’ with signature ‘object="MethyLumiSet",channel="character"’: no definition for class “MethyLumiSet”
in method for ‘negctls.stderr’ with signature ‘object="MethyLumiSet",channel="missing"’: no definition for class “MethyLumiSet”
in method for ‘negnorm’ with signature ‘object="MethyLumiSet",channel="character"’: no definition for class “MethyLumiSet”
in method for ‘negnorm’ with signature ‘object="MethyLumiM",channel="character"’: no definition for class “MethyLumiM”
in method for ‘negnorm’ with signature ‘object="MethyLumiSet",channel="missing"’: no definition for class “MethyLumiSet”
in method for ‘negnorm’ with signature ‘object="MethyLumiM",channel="missing"’: no definition for class “MethyLumiM”
in method for ‘normctls’ with signature ‘object="MethyLumiSet"’: no definition for class “MethyLumiSet”
in method for ‘normctls’ with signature ‘object="MethyLumiM"’: no definition for class “MethyLumiM”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import by ‘graphics::image’ when loading ‘methylumi’
* DONE (methylumi)