Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O [P] Q  R  S  T  U  V  W  X  Y  Z 

BioC 2.13: CHECK report for paircompviz on moscato1

This page was generated on 2014-04-05 09:51:24 -0700 (Sat, 05 Apr 2014).

Package 506/750HostnameOS / ArchBUILDCHECKBUILD BIN
paircompviz 1.0.0
Michal Burda
Snapshot Date: 2014-04-04 16:20:29 -0700 (Fri, 04 Apr 2014)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_13/madman/Rpacks/paircompviz
Last Changed Rev: 81642 / Revision: 88450
Last Changed Date: 2013-10-14 14:29:21 -0700 (Mon, 14 Oct 2013)
zin1 Linux (Ubuntu 12.04.4 LTS) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK [ OK ] OK 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK 

Summary

Package: paircompviz
Version: 1.0.0
Command: rm -rf paircompviz.buildbin-libdir && mkdir paircompviz.buildbin-libdir && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=paircompviz.buildbin-libdir paircompviz_1.0.0.tar.gz >paircompviz-install.out 2>&1 && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD check --library=paircompviz.buildbin-libdir --install="check:paircompviz-install.out" --force-multiarch --no-vignettes --timings paircompviz_1.0.0.tar.gz && mv paircompviz.buildbin-libdir/* paircompviz.Rcheck/ && rmdir paircompviz.buildbin-libdir
StartedAt: 2014-04-05 05:39:13 -0700 (Sat, 05 Apr 2014)
EndedAt: 2014-04-05 05:40:20 -0700 (Sat, 05 Apr 2014)
EllapsedTime: 67.2 seconds
RetCode: 0
Status:  OK  
CheckDir: paircompviz.Rcheck
Warnings: 0

Command output

* using log directory 'D:/biocbld/bbs-2.13-bioc/meat/paircompviz.Rcheck'
* using R version 3.0.3 (2014-03-06)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'paircompviz/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'paircompviz' version '1.0.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'paircompviz' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Package listed in more than one of Depends, Imports, Suggests, Enhances:
  'Rgraphviz'
A package should be listed in only one of these fields.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... NOTE
The following files are already in R: 'jss.bst', 'jss.cls'
Please remove them from your package.
* checking examples ...
** running examples for arch 'i386' ... [6s] OK
** running examples for arch 'x64' ... [5s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  'D:/biocbld/bbs-2.13-bioc/meat/paircompviz.Rcheck/00check.log'
for details.

paircompviz.Rcheck/00install.out:


install for i386

* installing *source* package 'paircompviz' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'paircompviz' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'paircompviz' as paircompviz_1.0.0.zip
* DONE (paircompviz)

paircompviz.Rcheck/examples_i386/paircompviz-Ex.timings:

nameusersystemelapsed
brokentrans0.020.000.12
hasse0.410.010.42
paircomp3.120.063.42
paircompviz-package0.050.000.14
transReduct000

paircompviz.Rcheck/examples_x64/paircompviz-Ex.timings:

nameusersystemelapsed
brokentrans0.000.020.01
hasse0.250.010.26
paircomp2.790.103.01
paircompviz-package0.060.000.06
transReduct000