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BioC 2.13: CHECK report for Rtreemix on moscato1

This page was generated on 2014-04-05 09:49:36 -0700 (Sat, 05 Apr 2014).

Package 635/750HostnameOS / ArchBUILDCHECKBUILD BIN
Rtreemix 1.24.0
Jasmina Bogojeska
Snapshot Date: 2014-04-04 16:20:29 -0700 (Fri, 04 Apr 2014)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_13/madman/Rpacks/Rtreemix
Last Changed Rev: 81642 / Revision: 88450
Last Changed Date: 2013-10-14 14:29:21 -0700 (Mon, 14 Oct 2013)
zin1 Linux (Ubuntu 12.04.4 LTS) / x86_64  OK  WARNINGS 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK [ WARNINGS ] OK 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  WARNINGS  OK 

Summary

Package: Rtreemix
Version: 1.24.0
Command: rm -rf Rtreemix.buildbin-libdir && mkdir Rtreemix.buildbin-libdir && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=Rtreemix.buildbin-libdir Rtreemix_1.24.0.tar.gz >Rtreemix-install.out 2>&1 && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD check --library=Rtreemix.buildbin-libdir --install="check:Rtreemix-install.out" --force-multiarch --no-vignettes --timings Rtreemix_1.24.0.tar.gz && mv Rtreemix.buildbin-libdir/* Rtreemix.Rcheck/ && rmdir Rtreemix.buildbin-libdir
StartedAt: 2014-04-05 06:36:27 -0700 (Sat, 05 Apr 2014)
EndedAt: 2014-04-05 06:39:11 -0700 (Sat, 05 Apr 2014)
EllapsedTime: 164.0 seconds
RetCode: 0
Status:  WARNINGS  
CheckDir: Rtreemix.Rcheck
Warnings: 1

Command output

* using log directory 'D:/biocbld/bbs-2.13-bioc/meat/Rtreemix.Rcheck'
* using R version 3.0.3 (2014-03-06)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'Rtreemix/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'Rtreemix' version '1.24.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'Rtreemix' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Packages listed in more than one of Depends, Imports, Suggests, Enhances:
  'methods' 'graph' 'Biobase'
A package should be listed in only one of these fields.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... WARNING
Non-portable flags in variable 'PKG_CFLAGS':
  -Wno-unused
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... NOTE
Note: information on .o files for i386 is not available
Note: information on .o files for x64 is not available
File 'D:/biocbld/bbs-2.13-bioc/meat/Rtreemix.buildbin-libdir/Rtreemix/libs/i386/Rtreemix.dll':
  Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
File 'D:/biocbld/bbs-2.13-bioc/meat/Rtreemix.buildbin-libdir/Rtreemix/libs/x64/Rtreemix.dll':
  Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console.  The detected symbols
are linked into the code but might come from libraries and not actually
be called.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking installed files from 'inst/doc' ... OK
* checking for old-style vignette sources ... NOTE
Vignette sources only in 'inst/doc':
  'Rtreemix.Rnw'
A 'vignettes' directory will be required as from R 3.1.0
* checking examples ...
** running examples for arch 'i386' ... [6s] OK
** running examples for arch 'x64' ... [6s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There were 3 notes.
See
  'D:/biocbld/bbs-2.13-bioc/meat/Rtreemix.Rcheck/00check.log'
for details.

Rtreemix.Rcheck/00install.out:


install for i386

* installing *source* package 'Rtreemix' ...
** libs
g++ -m32 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c Rtreemix.cc -o Rtreemix.o
Rtreemix.cc: In function 'SEXPREC* R_fit(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
Rtreemix.cc:596:7: warning: value computed is not used [-Wunused-value]
Rtreemix.cc: In function 'SEXPREC* R_fit1(SEXP, SEXP, SEXP, SEXP)':
Rtreemix.cc:938:7: warning: value computed is not used [-Wunused-value]
Rtreemix.cc: In function 'SEXPREC* R_fit0(SEXP, SEXP, SEXP, SEXP)':
Rtreemix.cc:1281:7: warning: value computed is not used [-Wunused-value]
Rtreemix.cc: In function 'SEXPREC* R_bootstrap(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
Rtreemix.cc:1728:7: warning: value computed is not used [-Wunused-value]
Rtreemix.cc: In function 'SEXPREC* R_random(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
Rtreemix.cc:2629:7: warning: value computed is not used [-Wunused-value]
g++ -m32 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c Rtreemix_patch.cc -o Rtreemix_patch.o
g++ -m32 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c WrapGraph.cc -o WrapGraph.o
g++ -m32 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c cfunctions.cc -o cfunctions.o
g++ -m32 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c kmeans.cc -o kmeans.o
g++ -m32 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c max_weight_branch.cc -o max_weight_branch.o
max_weight_branch.cc: In function 'void DOT(replaceleda::graph&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Node>, std::basic_string<char> >&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Edge>, double>&, char*)':
max_weight_branch.cc:97:3: warning: value computed is not used [-Wunused-value]
max_weight_branch.cc: In function 'replaceleda::list<replaceleda::RefCountPtr<replaceleda::Edge> > max_weight_subgraph_indeg_le_1(replaceleda::graph&)':
max_weight_branch.cc:142:3: warning: value computed is not used [-Wunused-value]
max_weight_branch.cc: In function 'void contract_all_cycles(replaceleda::graph&, int, replaceleda::array<replaceleda::list<replaceleda::RefCountPtr<replaceleda::Edge> > >, replaceleda::GRAPH<replaceleda::RefCountPtr<replaceleda::Node>, replaceleda::RefCountPtr<replaceleda::Edge> >&)':
max_weight_branch.cc:341:3: warning: value computed is not used [-Wunused-value]
max_weight_branch.cc: In function 'replaceleda::list<replaceleda::RefCountPtr<replaceleda::Edge> > MAX_WEIGHT_BRANCHING(replaceleda::graph&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Node>, std::basic_string<char> >&, replaceleda::edge_array<double>&)':
max_weight_branch.cc:432:3: warning: value computed is not used [-Wunused-value]
g++ -m32 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c mtree.cc -o mtree.o
mtree.cc: In function 'void mgraph_init(replaceleda::array<std::basic_string<char> >&, replaceleda::graph&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Node>, std::basic_string<char> >&, replaceleda::edge_array<double>&, replaceleda::map<int, replaceleda::RefCountPtr<replaceleda::Node> >&)':
mtree.cc:185:3: warning: value computed is not used [-Wunused-value]
mtree.cc:186:5: warning: value computed is not used [-Wunused-value]
mtree.cc: In function 'replaceleda::list<replaceleda::RefCountPtr<replaceleda::Edge> > mtree_bfs(replaceleda::graph&, replaceleda::node&)':
mtree.cc:272:3: warning: value computed is not used [-Wunused-value]
mtree.cc: In function 'double mtree_like(replaceleda::integer_vector&, replaceleda::graph&, replaceleda::map<int, replaceleda::RefCountPtr<replaceleda::Node> >&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Edge>, double>&)':
mtree.cc:321:3: warning: value computed is not used [-Wunused-value]
mtree.cc: In function 'replaceleda::integer_vector mtree_draw(int, replaceleda::graph&, replaceleda::node&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Edge>, double>&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Node>, int>&)':
mtree.cc:444:3: warning: value computed is not used [-Wunused-value]
mtree.cc: In function 'void mtree_directed(replaceleda::graph&, replaceleda::node&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Edge>, double>&, double, double)':
mtree.cc:784:3: warning: value computed is not used [-Wunused-value]
g++ -m32 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c mtreemix.cc -o mtreemix.o
mtreemix.cc: In function 'double mtree_state(replaceleda::map<replaceleda::RefCountPtr<replaceleda::Edge>, int>&, replaceleda::integer_vector&, replaceleda::graph&, replaceleda::map<int, replaceleda::RefCountPtr<replaceleda::Node> >&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Edge>, double>&)':
mtreemix.cc:1035:3: warning: value computed is not used [-Wunused-value]
g++ -m32 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c replaceleda.cc -o replaceleda.o
replaceleda.cc: In function 'bool replaceleda::Is_Acyclic(replaceleda::graph&, replaceleda::list<replaceleda::RefCountPtr<replaceleda::Edge> >&)':
replaceleda.cc:81:5: warning: value computed is not used [-Wunused-value]
replaceleda.cc: In function 'void replaceleda::CopyGraph(replaceleda::graph&, replaceleda::graph&)':
replaceleda.cc:128:5: warning: value computed is not used [-Wunused-value]
replaceleda.cc: In function 'void replaceleda::CopyGraph(replaceleda::GRAPH<replaceleda::RefCountPtr<replaceleda::Node>, replaceleda::RefCountPtr<replaceleda::Edge> >&, replaceleda::graph&)':
replaceleda.cc:149:5: warning: value computed is not used [-Wunused-value]
replaceleda.cc: In function 'std::ostream& replaceleda::operator<<(std::ostream&, replaceleda::graph&)':
replaceleda.cc:352:5: warning: value computed is not used [-Wunused-value]
replaceleda.cc: In function 'void replaceleda::printGraph(replaceleda::graph&, replaceleda::edge_array<double>&)':
replaceleda.cc:373:5: warning: value computed is not used [-Wunused-value]
g++ -m32 -shared -s -static-libgcc -o Rtreemix.dll tmp.def Rtreemix.o Rtreemix_patch.o WrapGraph.o cfunctions.o kmeans.o max_weight_branch.o mtree.o mtreemix.o replaceleda.o -lm -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.13-/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.13-bioc/meat/Rtreemix.buildbin-libdir/Rtreemix/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import by 'graphics::plot' when loading 'Rtreemix'
Creating a generic function for 'print' from package 'base' in package 'Rtreemix'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import by 'graphics::plot' when loading 'Rtreemix'

install for x64

* installing *source* package 'Rtreemix' ...
** libs
g++ -m64 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c Rtreemix.cc -o Rtreemix.o
Rtreemix.cc: In function 'SEXPREC* R_fit(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
Rtreemix.cc:596:7: warning: value computed is not used [-Wunused-value]
Rtreemix.cc: In function 'SEXPREC* R_fit1(SEXP, SEXP, SEXP, SEXP)':
Rtreemix.cc:938:7: warning: value computed is not used [-Wunused-value]
Rtreemix.cc: In function 'SEXPREC* R_fit0(SEXP, SEXP, SEXP, SEXP)':
Rtreemix.cc:1281:7: warning: value computed is not used [-Wunused-value]
Rtreemix.cc: In function 'SEXPREC* R_bootstrap(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
Rtreemix.cc:1728:7: warning: value computed is not used [-Wunused-value]
Rtreemix.cc: In function 'SEXPREC* R_random(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
Rtreemix.cc:2629:7: warning: value computed is not used [-Wunused-value]
g++ -m64 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c Rtreemix_patch.cc -o Rtreemix_patch.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c WrapGraph.cc -o WrapGraph.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c cfunctions.cc -o cfunctions.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c kmeans.cc -o kmeans.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c max_weight_branch.cc -o max_weight_branch.o
max_weight_branch.cc: In function 'void DOT(replaceleda::graph&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Node>, std::basic_string<char> >&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Edge>, double>&, char*)':
max_weight_branch.cc:97:3: warning: value computed is not used [-Wunused-value]
max_weight_branch.cc: In function 'replaceleda::list<replaceleda::RefCountPtr<replaceleda::Edge> > max_weight_subgraph_indeg_le_1(replaceleda::graph&)':
max_weight_branch.cc:142:3: warning: value computed is not used [-Wunused-value]
max_weight_branch.cc: In function 'void contract_all_cycles(replaceleda::graph&, int, replaceleda::array<replaceleda::list<replaceleda::RefCountPtr<replaceleda::Edge> > >, replaceleda::GRAPH<replaceleda::RefCountPtr<replaceleda::Node>, replaceleda::RefCountPtr<replaceleda::Edge> >&)':
max_weight_branch.cc:341:3: warning: value computed is not used [-Wunused-value]
max_weight_branch.cc: In function 'replaceleda::list<replaceleda::RefCountPtr<replaceleda::Edge> > MAX_WEIGHT_BRANCHING(replaceleda::graph&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Node>, std::basic_string<char> >&, replaceleda::edge_array<double>&)':
max_weight_branch.cc:432:3: warning: value computed is not used [-Wunused-value]
g++ -m64 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c mtree.cc -o mtree.o
mtree.cc: In function 'void mgraph_init(replaceleda::array<std::basic_string<char> >&, replaceleda::graph&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Node>, std::basic_string<char> >&, replaceleda::edge_array<double>&, replaceleda::map<int, replaceleda::RefCountPtr<replaceleda::Node> >&)':
mtree.cc:185:3: warning: value computed is not used [-Wunused-value]
mtree.cc:186:5: warning: value computed is not used [-Wunused-value]
mtree.cc: In function 'replaceleda::list<replaceleda::RefCountPtr<replaceleda::Edge> > mtree_bfs(replaceleda::graph&, replaceleda::node&)':
mtree.cc:272:3: warning: value computed is not used [-Wunused-value]
mtree.cc: In function 'double mtree_like(replaceleda::integer_vector&, replaceleda::graph&, replaceleda::map<int, replaceleda::RefCountPtr<replaceleda::Node> >&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Edge>, double>&)':
mtree.cc:321:3: warning: value computed is not used [-Wunused-value]
mtree.cc: In function 'replaceleda::integer_vector mtree_draw(int, replaceleda::graph&, replaceleda::node&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Edge>, double>&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Node>, int>&)':
mtree.cc:444:3: warning: value computed is not used [-Wunused-value]
mtree.cc: In function 'void mtree_directed(replaceleda::graph&, replaceleda::node&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Edge>, double>&, double, double)':
mtree.cc:784:3: warning: value computed is not used [-Wunused-value]
g++ -m64 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c mtreemix.cc -o mtreemix.o
mtreemix.cc: In function 'double mtree_state(replaceleda::map<replaceleda::RefCountPtr<replaceleda::Edge>, int>&, replaceleda::integer_vector&, replaceleda::graph&, replaceleda::map<int, replaceleda::RefCountPtr<replaceleda::Node> >&, replaceleda::map<replaceleda::RefCountPtr<replaceleda::Edge>, double>&)':
mtreemix.cc:1035:3: warning: value computed is not used [-Wunused-value]
g++ -m64 -I"D:/biocbld/BBS-2˜1.13-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c replaceleda.cc -o replaceleda.o
replaceleda.cc: In function 'bool replaceleda::Is_Acyclic(replaceleda::graph&, replaceleda::list<replaceleda::RefCountPtr<replaceleda::Edge> >&)':
replaceleda.cc:81:5: warning: value computed is not used [-Wunused-value]
replaceleda.cc: In function 'void replaceleda::CopyGraph(replaceleda::graph&, replaceleda::graph&)':
replaceleda.cc:128:5: warning: value computed is not used [-Wunused-value]
replaceleda.cc: In function 'void replaceleda::CopyGraph(replaceleda::GRAPH<replaceleda::RefCountPtr<replaceleda::Node>, replaceleda::RefCountPtr<replaceleda::Edge> >&, replaceleda::graph&)':
replaceleda.cc:149:5: warning: value computed is not used [-Wunused-value]
replaceleda.cc: In function 'std::ostream& replaceleda::operator<<(std::ostream&, replaceleda::graph&)':
replaceleda.cc:352:5: warning: value computed is not used [-Wunused-value]
replaceleda.cc: In function 'void replaceleda::printGraph(replaceleda::graph&, replaceleda::edge_array<double>&)':
replaceleda.cc:373:5: warning: value computed is not used [-Wunused-value]
g++ -m64 -shared -s -static-libgcc -o Rtreemix.dll tmp.def Rtreemix.o Rtreemix_patch.o WrapGraph.o cfunctions.o kmeans.o max_weight_branch.o mtree.o mtreemix.o replaceleda.o -lm -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.13-/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.13-bioc/meat/Rtreemix.buildbin-libdir/Rtreemix/libs/x64
** testing if installed package can be loaded
Warning: replacing previous import by 'graphics::plot' when loading 'Rtreemix'
* MD5 sums
packaged installation of 'Rtreemix' as Rtreemix_1.24.0.zip
* DONE (Rtreemix)

Rtreemix.Rcheck/examples_i386/Rtreemix-Ex.timings:

nameusersystemelapsed
L1.dist0.020.000.01
L2.norm000
Pval.dist000
RtreemixData-class0.070.000.06
RtreemixGPS-class0.090.000.09
RtreemixModel-class1.510.001.52
RtreemixSim-class0.060.000.07
RtreemixStats-class0.140.020.15
bootstrap-methods0.020.000.02
comp.models0.080.000.08
comp.trees0.050.000.05
confIntGPS-methods0.010.000.01
distribution-methods0.10.00.1
fit-methods0.750.000.75
generate-methods0.010.000.01
get.tree.levels0.020.000.02
gps-methods0.010.000.01
hiv.data0.020.000.02
kullback.leibler000
likelihoods-methods0.070.000.07
sim-methods0.050.000.05
stability.sim000

Rtreemix.Rcheck/examples_x64/Rtreemix-Ex.timings:

nameusersystemelapsed
L1.dist0.020.000.02
L2.norm000
Pval.dist000
RtreemixData-class0.110.000.11
RtreemixGPS-class000
RtreemixModel-class1.330.011.34
RtreemixSim-class0.050.000.05
RtreemixStats-class0.090.000.10
bootstrap-methods0.020.000.01
comp.models0.120.000.13
comp.trees0.060.000.06
confIntGPS-methods0.020.000.01
distribution-methods0.060.020.08
fit-methods1.750.001.74
generate-methods0.010.000.02
get.tree.levels0.020.000.02
gps-methods000
hiv.data0.010.000.02
kullback.leibler000
likelihoods-methods0.050.000.05
sim-methods0.030.000.03
stability.sim000