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BioC 2.12: BUILD report for snm on george2

This page was generated on 2013-10-09 09:37:40 -0700 (Wed, 09 Oct 2013).

Package 605/671HostnameOS / ArchBUILDCHECKBUILD BIN
snm 1.8.0
Brig Mecham
Snapshot Date: 2013-10-08 17:00:48 -0700 (Tue, 08 Oct 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_12/madman/Rpacks/snm
Last Changed Rev: 75263 / Revision: 81334
Last Changed Date: 2013-04-03 14:32:27 -0700 (Wed, 03 Apr 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64 [ ERROR ] skipped 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  ERROR  skipped  skipped 
petty Mac OS X Snow Leopard (10.6.8) / x86_64  ERROR  skipped  skipped 

Summary

Package: snm
Version: 1.8.0
Command: /home/biocbuild/bbs-2.12-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data snm
StartedAt: 2013-10-08 22:29:29 -0700 (Tue, 08 Oct 2013)
EndedAt: 2013-10-08 22:30:04 -0700 (Tue, 08 Oct 2013)
EllapsedTime: 35.2 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

* checking for file ‘snm/DESCRIPTION’ ... OK
* preparing ‘snm’:
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: lme4
Loading required package: lattice
Loading required package: Matrix
Loading required package: splines
Loading required package: corpcor

Error: processing vignette ‘snm.Rnw’ failed with diagnostics:
 chunk 3 (label = normalize.simulated.example.1) 
Error in lmer(y ˜ -1 + probes + +probes:A2 + probes:A3 + probes:A4 + probes:A5 +  : 
  ‘control’ is not a list; use lmerControl()
Execution halted