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Package 450/609HostnameOS / ArchBUILDCHECKBUILD BIN
plier 1.28.0
Crispin Miller
Snapshot Date: 2013-03-24 16:21:20 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_11/madman/Rpacks/plier
Last Changed Rev: 70050 / Revision: 74773
Last Changed Date: 2012-10-01 15:16:24 -0700 (Mon, 01 Oct 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
perceval Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: plier
Version: 1.28.0
Command: rm -rf plier.buildbin-libdir && mkdir plier.buildbin-libdir && D:\biocbld\bbs-2.11-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=plier.buildbin-libdir plier_1.28.0.tar.gz
StartedAt: 2013-03-25 04:12:52 -0700 (Mon, 25 Mar 2013)
EndedAt: 2013-03-25 04:13:03 -0700 (Mon, 25 Mar 2013)
EllapsedTime: 11.2 seconds
RetCode: 0
Status:  OK  
PackageFile: plier_1.28.0.zip
PackageFileSize: 106.8 KiB

Command output


install for i386

* installing *source* package 'plier' ...
** libs
g++ -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c affyplier.cpp -o affyplier.o
g++ -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c plier_impl.cpp -o plier_impl.o
g++ -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c plieralg.cpp -o plieralg.o
plieralg.cpp: In function 'long int NewtonPlier(plier_data*, double&)':
plieralg.cpp:905:14: warning: variable 'icount' set but not used [-Wunused-but-set-variable]
plieralg.cpp:1257:30: warning: 'LogLikelihood' may be used uninitialized in this function [-Wuninitialized]
plieralg.cpp: At global scope:
plieralg.cpp:49:12: warning: 'g_ErrorCode' defined but not used [-Wunused-variable]
g++ -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c rwrapper.cpp -o rwrapper.o
g++ -m32 -shared -s -static-libgcc -o plier.dll tmp.def affyplier.o plier_impl.o plieralg.o rwrapper.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.11-/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.11-bioc/meat/plier.buildbin-libdir/plier/libs/i386
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'plier' ...
** libs
g++ -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c affyplier.cpp -o affyplier.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c plier_impl.cpp -o plier_impl.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c plieralg.cpp -o plieralg.o
plieralg.cpp: In function 'long int NewtonPlier(plier_data*, double&)':
plieralg.cpp:905:14: warning: variable 'icount' set but not used [-Wunused-but-set-variable]
plieralg.cpp:1257:30: warning: 'LogLikelihood' may be used uninitialized in this function [-Wuninitialized]
plieralg.cpp: At global scope:
plieralg.cpp:49:12: warning: 'g_ErrorCode' defined but not used [-Wunused-variable]
g++ -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c rwrapper.cpp -o rwrapper.o
g++ -m64 -shared -s -static-libgcc -o plier.dll tmp.def affyplier.o plier_impl.o plieralg.o rwrapper.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.11-/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.11-bioc/meat/plier.buildbin-libdir/plier/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'plier' as plier_1.28.0.zip

* DONE (plier)