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Package 442/609HostnameOS / ArchBUILDCHECKBUILD BIN
phyloseq 1.2.1
Paul J. McMurdie
Snapshot Date: 2013-03-24 16:21:20 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_11/madman/Rpacks/phyloseq
Last Changed Rev: 72833 / Revision: 74773
Last Changed Date: 2013-01-23 13:49:30 -0800 (Wed, 23 Jan 2013)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
perceval Mac OS X Leopard (10.5.8) / i386  OK  OK [ OK ]

Summary

Package: phyloseq
Version: 1.2.1
Command: rm -rf phyloseq.buildbin-libdir && mkdir phyloseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh phyloseq_1.2.1.tar.gz /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R phyloseq.buildbin-libdir
StartedAt: 2013-03-25 02:00:08 -0700 (Mon, 25 Mar 2013)
EndedAt: 2013-03-25 02:00:23 -0700 (Mon, 25 Mar 2013)
EllapsedTime: 14.9 seconds
RetCode: 0
Status:  OK 
PackageFile: phyloseq_1.2.1.tgz
PackageFileSize: 2.079 MiB

Command output

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=phyloseq.buildbin-libdir phyloseq_1.2.1.tar.gz'
>>>>>>> 

* installing *source* package 'phyloseq' ...
** R
** data
** inst
** preparing package for lazy loading
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "connection" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "file" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "pipe" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "textConnection" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
** help
*** installing help indices
** building package indices
** installing vignettes
   'phyloseq_analysis.Rnw' 
   'phyloseq_basics.Rnw' 
** testing if installed package can be loaded
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "connection" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "file" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "pipe" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "textConnection" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class

* DONE (phyloseq)