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Package 423/609HostnameOS / ArchBUILDCHECKBUILD BIN
OSAT 1.6.0
Li Yan
Snapshot Date: 2013-03-24 16:21:20 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_11/madman/Rpacks/OSAT
Last Changed Rev: 73136 / Revision: 74773
Last Changed Date: 2013-02-04 11:20:00 -0800 (Mon, 04 Feb 2013)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
perceval Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 

Summary

Package: OSAT
Version: 1.6.0
Command: /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch OSAT_1.6.0.tar.gz
StartedAt: 2013-03-25 00:41:16 -0700 (Mon, 25 Mar 2013)
EndedAt: 2013-03-25 00:41:58 -0700 (Mon, 25 Mar 2013)
EllapsedTime: 42.8 seconds
RetCode: 0
Status:  OK 
CheckDir: OSAT.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.11-bioc/meat/OSAT.Rcheck'
* using R version 2.15.3 (2013-03-01)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'OSAT/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'OSAT' version '1.6.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'OSAT' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

OSAT.Rcheck/00install.out:

* installing *source* package 'OSAT' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'OSAT.Rnw' 
** testing if installed package can be loaded

* DONE (OSAT)

OSAT.Rcheck/OSAT-Ex.timings:

nameusersystemelapsed
BeadChip-class0.0180.0010.020
BeadPlate-class0.0470.0010.049
MSAroboticPlate-class0.4980.0130.513
QC2.1120.0102.129
create.optimized.setup2.1180.0132.178
example.setup0.0530.0090.066
gContainer-class0.0310.0030.037
gExperimentSetup-class0.0980.0040.103
gSample-class0.0250.0020.027
gSlide-class0.0030.0010.004
get.experiment.setup2.0280.0082.073
multi.barplot0.0150.0020.018
multi.chisq.test0.0190.0020.022
optimal.block2.8870.0112.915
optimal.shuffle2.1030.0102.139