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Package 3/233HostnameOS / ArchBUILDCHECKBUILD BIN
ACME 1.4.0
Sean Davis
Snapshot Date: 2008-04-02 12:12:36 -0700 (Wed, 02 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/ACME
Last Changed Rev: 28558 / Revision: 30807
Last Changed Date: 2007-11-07 23:08:50 -0800 (Wed, 07 Nov 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: ACME
Version: 1.4.0
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD INSTALL --build --library=ACME.buildbin-libdir ACME_1.4.0.tar.gz
StartedAt: 2008-04-02 22:46:03 -0700 (Wed, 02 Apr 2008)
EndedAt: 2008-04-02 22:47:07 -0700 (Wed, 02 Apr 2008)
EllapsedTime: 63.9 seconds
RetCode: 0
Status: OK
PackageFile: ACME_1.4.0.zip
PackageFileSize: 10.07 MiB

Command output

installing R.css in D:/biocbld/bbs-2.1-bioc/meat/ACME.buildbin-libdir

Using auto-selected zip options 'ACME-ZIPDATA=zip'

---------- Making package ACME ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making windowChisq.d from windowChisq.c
gcc-sjlj  -std=gnu99  -ID:/biocbld/bbs-2.1-bioc/R/include     -O3 -Wall  -c windowChisq.c -o windowChisq.o
windowChisq.c: In function 'windowChisq':
windowChisq.c:58: warning: suggest parentheses around comparison in operand of &
windowChisq.c:63: warning: suggest parentheses around comparison in operand of &
windowChisq.c:21: warning: unused variable 'xa'
windowChisq.c: At top level:
windowChisq.c:86: warning: initialization from incompatible pointer type
windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I D:/biocbld/bbs-2.1-bioc/R/include  -i ACME_res.rc -o ACME_res.o
gcc-sjlj  -std=gnu99  -shared -s  -o ACME.dll ACME.def windowChisq.o ACME_res.o  -LD:/biocbld/bbs-2.1-bioc/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  zipping data
  installing help
 >>> Building/Updating help pages for package 'ACME'
     Formats: text html latex example chm 
  aGFF-class                        text    html    latex   example chm
  aGFFCalc-class                    text    html    latex   example chm
  do.aGFF.calc                      text    html    latex   example chm
  example.agff                      text    html    latex   example chm
  findClosestGene                   text    html    latex   example chm
  findRegions                       text    html    latex   example chm
  getRefflat                        text    html    latex   example chm
  read.resultsGFF                   text    html    latex   example chm
  write.sgr                         text    html    latex   example chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "gram Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.2300\ACME\chm\ACME.chm



HHC4016: Warning: Cannot open "gram Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".





The following files were not compiled:

  adding MD5 sums

packaged installation of package 'ACME' as ACME_1.4.0.zip
* DONE (ACME)