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Package 182/208OSArchBUILDCHECKBUILD BIN

SemSim

1.1.2

Xiang Guo
Linux (SUSE 9.2) x86_64 OK  OK 
Linux (SUSE 10.1) x86_64 OK  OK 
Linux (SUSE 9.2) i686 OK  OK 
Solaris 2.9 sparc OK  OK 
Windows Server 2003 x86_64[ ERROR ]skippedskipped
Windows Server 2003 NA ERROR skippedskipped
Mac OS X (10.4.6) i686 OK  OK 
Package: SemSim
Version: 1.1.2
Command: D:\biocbld\2.0d\R\bin\R.exe CMD build SemSim
RetCode: 1
Time: 41.1 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'SemSim/DESCRIPTION' ... OK
* preparing 'SemSim':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/2.0d/tmpdir/Rinst453676449


---------- Making package SemSim ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
    preparing to lazyload sysdata
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'SemSim'
     Formats: text html latex example chm 
  Schreiber                         text    html    latex   example chm
  SemSim-internal                   text    html    latex           chm
  SemSim-package                    text    html    latex           chm
  geneSim                           text    html    latex   example chm
  mgeneSim                          text    html    latex   example chm
  mtermSim                          text    html    latex   example chm
  termSim                           text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\2.0d\Rpacks\SemSim\chm\SemSim.chm





Compile time: 0 minutes, 0 seconds

8	Topics

23	Local links

0	Internet links

1	Graphic





Created d:\biocbld\2.0d\Rpacks\SemSim\chm\SemSim.chm, 23,049 bytes

Compression increased file by 395 bytes.

  adding MD5 sums

* DONE (SemSim)
* creating vignettes ... ERROR
Loading required package: GO
Loading required package: annotate
Loading required package: Biobase

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.


Error:  chunk 2 
Error in library(biomaRt) : there is no package called 'biomaRt'
Error in buildVignettes(dir = ".") : Error:  chunk 2 
Error in library(biomaRt) : there is no package called 'biomaRt'
Execution halted