flowVS

This package is for version 3.18 of Bioconductor; for the stable, up-to-date release version, see flowVS.

Variance stabilization in flow cytometry (and microarrays)


Bioconductor version: 3.18

Per-channel variance stabilization from a collection of flow cytometry samples by Bertlett test for homogeneity of variances. The approach is applicable to microarrays data as well.

Author: Ariful Azad

Maintainer: Ariful Azad <azad at iu.edu>

Citation (from within R, enter citation("flowVS")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowVS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowVS")
flowVS: Cell population matching and meta-clustering in Flow Cytometry PDF R Script
Reference Manual PDF

Details

biocViews CellBasedAssays, FlowCytometry, ImmunoOncology, Microarray, Software
Version 1.34.0
In Bioconductor since BioC 3.1 (R-3.2) (9 years)
License Artistic-2.0
Depends R (>= 3.2), methods, flowCore, flowViz, flowStats
Imports
System Requirements
URL
See More
Suggests knitr, vsn
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowVS_1.34.0.tar.gz
Windows Binary flowVS_1.34.0.zip
macOS Binary (x86_64) flowVS_1.34.0.tgz
macOS Binary (arm64) flowVS_1.34.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowVS
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowVS
Bioc Package Browser https://code.bioconductor.org/browse/flowVS/
Package Short Url https://bioconductor.org/packages/flowVS/
Package Downloads Report Download Stats