ConsensusClusterPlus

Bioconductor version: Release (3.20)

algorithm for determining cluster count and membership by stability evidence in unsupervised analysis

Author: Matt Wilkerson <mdwilkerson at outlook.com>, Peter Waltman <waltman at soe.ucsc.edu>

Maintainer: Matt Wilkerson <mdwilkerson at outlook.com>

Citation (from within R, enter citation("ConsensusClusterPlus")):

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ConsensusClusterPlus")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ConsensusClusterPlus")

ConsensusClusterPlus Tutorial	PDF	R Script
Reference Manual	PDF
NEWS	Text

biocViews	Clustering, Software
Version	1.70.0
In Bioconductor since	BioC 2.6 (R-2.11) (14.5 years)
License	GPL version 2
Depends
Imports	Biobase, ALL, graphics, stats, utils, cluster
System Requirements
URL

Suggests
Linking To
Enhances
Depends On Me
Imports Me	CATALYST, ChromSCape, DEGreport, FlowSOM, DeSousa2013, ccml, iSubGen, longmixr, neatmaps, scRNAtools
Suggests Me	TCGAbiolinks, tidytof
Links To Me
Build Report	Build Report

Follow Installation instructions to use this package in your R session.

Source Package	ConsensusClusterPlus_1.70.0.tar.gz
Windows Binary (x86_64)	ConsensusClusterPlus_1.70.0.zip
macOS Binary (x86_64)	ConsensusClusterPlus_1.70.0.tgz
macOS Binary (arm64)	ConsensusClusterPlus_1.69.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/ConsensusClusterPlus
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ConsensusClusterPlus
Bioc Package Browser	https://code.bioconductor.org/browse/ConsensusClusterPlus/
Package Short Url	https://bioconductor.org/packages/ConsensusClusterPlus/
Package Downloads Report	Download Stats