QuartPAC
This is the development version of QuartPAC; for the stable release version, see QuartPAC.
Identification of mutational clusters in protein quaternary structures
Bioconductor version: Development (3.21)
Identifies clustering of somatic mutations in proteins over the entire quaternary structure.
Author: Gregory Ryslik, Yuwei Cheng, Hongyu Zhao
Maintainer: Gregory Ryslik <gregory.ryslik at yale.edu>
Citation (from within R, enter
citation("QuartPAC")
):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("QuartPAC")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Reference Manual |
Details
biocViews | Clustering, Proteomics, Software, SomaticMutation |
Version | 1.39.0 |
In Bioconductor since | BioC 3.1 (R-3.2) (9.5 years) |
License | GPL-2 |
Depends | iPAC, GraphPAC, SpacePAC, data.table |
Imports | Biostrings, pwalign |
System Requirements | |
URL |
See More
Suggests | RUnit, BiocGenerics, rgl |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary (x86_64) | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/QuartPAC |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/QuartPAC |
Package Short Url | https://bioconductor.org/packages/QuartPAC/ |
Package Downloads Report | Download Stats |