vulcandata

DOI: 10.18129/B9.bioc.vulcandata    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see vulcandata.

VirtUaL ChIP-Seq data Analysis using Networks, dummy dataset

Bioconductor version: 3.9

This package provides a dummy regulatory network and ChIP-Seq dataset for running examples in the vulcan package

Author: Federico M. Giorgi, Andrew N. Holding, Florian Markowetz

Maintainer: Federico M. Giorgi <federico.giorgi at gmail.com>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("vulcandata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("vulcandata")

 

PDF	R Script	Vulcan: VirtUaL ChIP-Seq Analysis through Networks, dummy datasets
PDF		Reference Manual

Details

biocViews	CancerData, ChIPSeqData, ExperimentData, Homo_sapiens_Data
Version	1.6.0
License	LGPL-3
Depends
Imports	utils
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	vulcan
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	vulcandata_1.6.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/vulcandata
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/vulcandata
Package Short Url	https://bioconductor.org/packages/vulcandata/
Package Downloads Report	Download Stats