NeighborNet

DOI: 10.18129/B9.bioc.NeighborNet    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see NeighborNet.

Neighbor_net analysis

Bioconductor version: 3.9

Identify the putative mechanism explaining the active interactions between genes in the investigated phenotype.

Author: Sahar Ansari <saharansari at wayne.edu> and Sorin Draghici <sorin at wayne.edu>

Maintainer: Sahar Ansari <saharansari at wayne.edu>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("NeighborNet")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("NeighborNet")

 

PDF	R Script	NeighborNet
PDF		Reference Manual

Details

biocViews	GeneExpression, GraphAndNetwork, Software, StatisticalMethod
Version	1.2.0
In Bioconductor since	BioC 3.8 (R-3.5) (1 year)
License	CC BY-NC-ND 4.0
Depends	methods
Imports	graph, stats
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	NeighborNet_1.2.0.tar.gz
Windows Binary	NeighborNet_1.2.0.zip
Mac OS X 10.11 (El Capitan)	NeighborNet_1.2.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/NeighborNet
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/NeighborNet
Package Short Url	https://bioconductor.org/packages/NeighborNet/
Package Downloads Report	Download Stats