HELP

DOI: 10.18129/B9.bioc.HELP    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see HELP.

Tools for HELP data analysis

Bioconductor version: 3.9

The package contains a modular pipeline for analysis of HELP microarray data, and includes graphical and mathematical tools with more general applications.

Author: Reid F. Thompson <reid.thompson at gmail.com>, John M. Greally <john.greally at einstein.yu.edu>, with contributions from Mark Reimers <mreimers at vcu.edu>

Maintainer: Reid F. Thompson <reid.thompson at gmail.com>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("HELP")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HELP")

 

PDF	R Script	1. Primer
PDF		Reference Manual

Details

biocViews	CpGIsland, DNAMethylation, DataImport, Microarray, Preprocessing, QualityControl, Software, TwoChannel, Visualization
Version	1.42.0
In Bioconductor since	BioC 2.3 (R-2.8) (11 years)
License	GPL (>= 2)
Depends	R (>= 2.8.0), stats, graphics, grDevices, Biobase, methods
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	HELP_1.42.0.tar.gz
Windows Binary	HELP_1.42.0.zip
Mac OS X 10.11 (El Capitan)	HELP_1.42.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/HELP
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/HELP
Package Short Url	https://bioconductor.org/packages/HELP/
Package Downloads Report	Download Stats