normalize {proBatch} | R Documentation |
Data normalization methods
data_matrix |
features (in rows) vs samples (in columns) matrix, with feature IDs in rownames and file/sample names as colnames. Usually the log transformed version of the original data |
sample_id_col |
name of the column in sample_annotation file, where the filenames (colnames of the data matrix are found) |
measure_col |
if 'df_long' is among the parameters, it is the column with expression/abundance/intensity, otherwise, it is used internally for consistency |