getData {methylKit} | R Documentation |
The functions retrieves the table containing methylation information from
methylKit
Objects.
The data retrived from this function is of a data.frame
.
This is basically containing all relevant methylation information per
genomic region or base.
getData(x) ## S4 method for signature 'methylBase' getData(x) ## S4 method for signature 'methylRaw' getData(x) ## S4 method for signature 'methylDiff' getData(x) ## S4 method for signature 'methylRawDB' getData(x) ## S4 method for signature 'methylBaseDB' getData(x) ## S4 method for signature 'methylDiffDB' getData(x)
x |
an |
data frame for methylation events
data(methylKit) # following commands show first lines of returned # data.frames from getData() function head( getData(methylBase.obj) ) head( getData(methylDiff.obj)) head(getData(methylRawList.obj[[1]]))