curatedCRCData

DOI: 10.18129/B9.bioc.curatedCRCData    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see curatedCRCData.

Colorectal Cancer Gene Expression Analysis

Bioconductor version: 3.8

The curatedCRC package provides relevant functions and data for gene expression analysis in patients with colorectal cancer.

Author: Princy Parsana, Markus Riester, Curtis Huttenhower, Levi Waldron

Maintainer: Princy Parsana <princyparsana at jhu.edu>

Citation (from within R, enter citation("curatedCRCData")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("curatedCRCData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("curatedCRCData")

 

PDF R Script curatedCRCData
PDF   Reference Manual
Text   NEWS

Details

biocViews Cancer, Colorectal, ExperimentData, RNAExpressionData, TCGA
Version 2.14.0
License Artistic-2.0
Depends R (>= 2.10.0), nlme
Imports BiocGenerics
LinkingTo
Suggests survival, RUnit, metafor, genefilter, logging, sva, xtable, futile.logger, BiocStyle
SystemRequirements
Enhances
URL https://bitbucket.org/biobakery/curatedcrcdata
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package curatedCRCData_2.14.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/curatedCRCData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/curatedCRCData
Package Short Url http://bioconductor.org/packages/curatedCRCData/
Package Downloads Report Download Stats

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