MEDIPSData

DOI: 10.18129/B9.bioc.MEDIPSData    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see MEDIPSData.

Example data for MEDIPS and QSEA packages

Bioconductor version: 3.8

Example data for MEDIPS and QSEA packages, consisting of chromosome 22 MeDIP and control/Input sample data. Additionally, the package contains MeDIP seq data from 3 NSCLC samples and adjacent normal tissue (chr 20-22). All data has been aligned to human genome hg19.

Author: Lukas Chavez

Maintainer: Lukas Chavez <lchavez at liai.org>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("MEDIPSData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	ExperimentData, Genome, SequencingData
Version	1.18.0
License	GPL (>= 2)
Depends	R (>= 2.15.0)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	MEDIPS, qsea
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MEDIPSData_1.18.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/MEDIPSData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MEDIPSData
Package Short Url	http://bioconductor.org/packages/MEDIPSData/
Package Downloads Report	Download Stats