goTools

DOI: 10.18129/B9.bioc.goTools    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see goTools.

Functions for Gene Ontology database

Bioconductor version: 3.8

Wraper functions for description/comparison of oligo ID list using Gene Ontology database

Author: Yee Hwa (Jean) Yang <jean at biostat.ucsf.edu>, Agnes Paquet <paquetagnes at yahoo.com>

Maintainer: Agnes Paquet <paquetagnes at yahoo.com>

Citation (from within R, enter citation("goTools")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("goTools")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("goTools")

 

PDF R Script goTools overview
PDF   Reference Manual
Text   LICENSE

Details

biocViews GO, Microarray, Software, Visualization
Version 1.56.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 14 years)
License GPL-2
Depends GO.db
Imports AnnotationDbi, GO.db, graphics, grDevices
LinkingTo
Suggests hgu133a.db
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package goTools_1.56.0.tar.gz
Windows Binary goTools_1.56.0.zip
Mac OS X 10.11 (El Capitan) goTools_1.56.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/goTools
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/goTools
Package Short Url http://bioconductor.org/packages/goTools/
Package Downloads Report Download Stats

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