genomes

DOI: 10.18129/B9.bioc.genomes    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see genomes.

Genome sequencing project metadata

Bioconductor version: 3.8

Download genome and assembly reports from NCBI

Author: Chris Stubben

Maintainer: Chris Stubben <stubben at lanl.gov>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("genomes")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("genomes")

 

PDF	R Script	Genome metadata
PDF		Reference Manual

Details

biocViews	Annotation, Genetics, Software
Version	3.12.0
In Bioconductor since	BioC 2.6 (R-2.11) (9 years)
License	GPL-3
Depends	readr, curl
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	genomes_3.12.0.tar.gz
Windows Binary	genomes_3.12.0.zip
Mac OS X 10.11 (El Capitan)	genomes_3.12.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/genomes
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/genomes
Package Short Url	http://bioconductor.org/packages/genomes/
Package Downloads Report	Download Stats