anno_density {ComplexHeatmap} | R Documentation |
Using kernel density as annotation
anno_density(x, which = c("column", "row"), gp = gpar(fill = "#CCCCCC"), type = c("lines", "violin", "heatmap"), ...)
x |
a matrix or a list. If |
which |
is the annotation a column annotation or a row annotation? |
gp |
graphic parameters. Note it is ignored if |
type |
which type of graphics is used to represent density distribution. |
... |
pass to |
A graphic function which can be set in HeatmapAnnotation
constructor method.
Zuguang Gu <z.gu@dkfz.de>
mat = matrix(rnorm(32), nrow = 4) f = anno_density(mat) grid.newpage(); f(1:8) f = anno_density(mat, which = "row", type = "violin") grid.newpage(); f(1:4) lt = lapply(1:4, function(i) rnorm(8)) f = anno_density(lt, type = "heatmap") grid.newpage(); f(1:4)