This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see clstutils.
Bioconductor version: 3.7
Tools for performing taxonomic assignment based on phylogeny using pplacer and clst.
Author: Noah Hoffman
Maintainer: Noah Hoffman <ngh2 at uw.edu>
Citation (from within R,
enter citation("clstutils")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("clstutils")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("clstutils")
R Script | clst | |
R Script | clstutils | |
Reference Manual |
biocViews | Classification, QualityControl, Sequencing, Software, Visualization |
Version | 1.28.0 |
In Bioconductor since | BioC 2.8 (R-2.13) (7.5 years) |
License | GPL-3 |
Depends | R (>= 2.10), clst, rjson, ape |
Imports | lattice, RSQLite |
LinkingTo | |
Suggests | RUnit, RSVGTipsDevice |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | clstutils_1.28.0.tar.gz |
Windows Binary | clstutils_1.28.0.zip |
Mac OS X 10.11 (El Capitan) | clstutils_1.28.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/clstutils |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/clstutils |
Package Short Url | http://bioconductor.org/packages/clstutils/ |
Package Downloads Report | Download Stats |
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