This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see bigmelon.
Bioconductor version: 3.7
Methods for working with Illumina arrays using gdsfmt.
Author: Tyler J. Gorrie-Stone [cre, aut], Ayden Saffari [aut], Karim Malki [aut], Leonard C. Schalkwyk [aut]
Maintainer: Tyler J. Gorrie-Stone <tgorri at essex.ac.uk>
Citation (from within R,
enter citation("bigmelon")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("bigmelon")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("bigmelon")
R Script | The bigmelon Package | |
Reference Manual | ||
Text | NEWS |
biocViews | CpGIsland, DNAMethylation, DataImport, MethylationArray, Microarray, Preprocessing, QualityControl, Software, TwoChannel |
Version | 1.6.0 |
In Bioconductor since | BioC 3.4 (R-3.3) (2 years) |
License | GPL-3 |
Depends | R (>= 3.3), wateRmelon(>= 1.19.1), gdsfmt(>= 1.0.4), methods, minfi(>= 1.21.0), Biobase, methylumi |
Imports | stats, utils, GEOquery, graphics, BiocGenerics |
LinkingTo | |
Suggests | BiocGenerics, BiocStyle, minfiData, parallel, IlluminaHumanMethylation450kanno.ilmn12.hg19, IlluminaHumanMethylationEPICanno.ilm10b2.hg19 |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | bigmelon_1.6.0.tar.gz |
Windows Binary | bigmelon_1.6.0.zip |
Mac OS X 10.11 (El Capitan) | bigmelon_1.6.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/bigmelon |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/bigmelon |
Package Short Url | http://bioconductor.org/packages/bigmelon/ |
Package Downloads Report | Download Stats |
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