summary_mQTL {mQTL.NMR} | R Documentation |
This function generates a table containing the genetic markers and thier associated metabolomic variables and estimated LOD score.
summary_mQTL(results, redfile,Th = 5)
results |
a list sepcifying the mQTL mapping results |
redfile |
a text file containing the parameters of identified clusters(.PPM file) |
Th |
a numerical paramater indicating the threshold of top accepted score (LOD or -log10(p-value)) |
Generates a text file containing a table of summary of mQTL mapping results
returns Summaries
Jean-Baptiste Cazier and Lyamine Hedjazi
load_datafiles() load(results) Th<-10 ## LOD threshold summary_mQTL(results,rectangle_SRV,Th)## summarizes mQTL results in a table