findNewTSS {ORFik}R Documentation

Finds max peaks per trancsript from reads in the cagefile

Description

Finds max peaks per trancsript from reads in the cagefile

Usage

findNewTSS(fiveUTRs, cageData, extension)

Arguments

fiveUTRs

The 5' leader sequences as GRangesList

cageData

The location of the cage-file

extension

The number of basses upstream to add on transcripts

Value

a Hits object


[Package ORFik version 1.0.0 Index]