fixSeqnames {ORFik}R Documentation

Seqnames cleanup

Description

For many datasets, the fa file and the gtf file have different naming This functions tries to fix the naming to the GRanges standard chrX instead of X chr1 instead of 1 etc..

Usage

fixSeqnames(grl)

Arguments

grl

a GRangesList

Value

a GRangesList with fixed seqnames


[Package ORFik version 1.0.0 Index]