getProteinsStats {DAPAR} | R Documentation |
This function computes the number of proteins that are only defined by specific peptides, shared peptides or a mixture of two.
getProteinsStats(matUnique, matShared)
matUnique |
The adjacency matrix with only specific peptides. |
matShared |
The adjacency matrix with both specific and shared peptides. |
A list
Samuel Wieczorek
require(DAPARdata) data(Exp1_R25_pept) protID <- "Protein.group.IDs" MShared <- BuildAdjacencyMatrix(Exp1_R25_pept[1:1000], protID, FALSE) MUnique <- BuildAdjacencyMatrix(Exp1_R25_pept[1:1000], protID, TRUE) getProteinsStats(MUnique,MShared)