Bioconductor version: Release (3.6)
Base classes and functions for parsing and exporting phylogenetic trees.
Author: Guangchuang Yu [aut, cre], Tommy Tsan-Yuk Lam [aut, ths], Casey Dunn [ctb], Bradley Jones [ctb]
Maintainer: Guangchuang Yu <guangchuangyu at gmail.com>
Citation (from within R,
enter citation("treeio")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("treeio")
HTML | R Script | Tree Data Input and Output |
Reference Manual | ||
Text | NEWS |
biocViews | Alignment, Annotation, Clustering, DataImport, MultipleSequenceAlignment, Software |
Version | 1.2.2 |
In Bioconductor since | BioC 3.5 (R-3.4) (1 year) |
License | Artistic-2.0 |
Depends | R (>= 3.3.2) |
Imports | ape, ggplot2, jsonlite, magrittr, methods, rvcheck |
LinkingTo | |
Suggests | Biostrings, ggtree(>= 1.7.5), knitr, prettydoc, testthat |
SystemRequirements | |
Enhances | |
URL | https://guangchuangyu.github.io/treeio |
BugReports | https://github.com/GuangchuangYu/treeio/issues |
Depends On Me | ggtree |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | treeio_1.2.2.tar.gz |
Windows Binary | treeio_1.2.2.zip |
Mac OS X 10.11 (El Capitan) | treeio_1.2.2.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/treeio |
Package Short Url | http://bioconductor.org/packages/treeio/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.6 | Source Archive |
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