Bioconductor version: Release (3.6)
Methods to create complex IGV genome browser sessions and dynamic IGV reports in HTML pages.
Author: Tom Carroll, Sanjay Khadayate, Anne Pajon, Ziwei Liang
Maintainer: Tom Carroll <tc.infomatics at gmail.com>
Citation (from within R,
enter citation("tracktables")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("tracktables")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("tracktables")
R Script | Creating IGV HTML reports with tracktables | |
Reference Manual | ||
Text | NEWS |
biocViews | ReportWriting, Sequencing, Software |
Version | 1.12.0 |
In Bioconductor since | BioC 3.0 (R-3.1) (3.5 years) |
License | GPL (>= 3) |
Depends | R (>= 3.0.0) |
Imports | IRanges, GenomicRanges, XVector, Rsamtools, XML, tractor.base, stringr, RColorBrewer, methods |
LinkingTo | |
Suggests | knitr, BiocStyle |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | tracktables_1.12.0.tar.gz |
Windows Binary | tracktables_1.12.0.zip |
Mac OS X 10.11 (El Capitan) | tracktables_1.12.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/tracktables |
Package Short Url | http://bioconductor.org/packages/tracktables/ |
Package Downloads Report | Download Stats |
Documentation »
Bioconductor
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations: