readat

DOI: 10.18129/B9.bioc.readat    

Functionality to Read and Manipulate SomaLogic ADAT files

Bioconductor version: Release (3.6)

This package contains functionality to import, transform and annotate data from ADAT files generated by the SomaLogic SOMAscan platform.

Author: Richard Cotton [cre, aut], Aditya Bhagwat [aut]

Maintainer: Richard Cotton <richierocks at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("readat")

Documentation

HTML	R Script	Introduction
PDF		Reference Manual
Text		NEWS

Details

biocViews	DataImport, GeneExpression, OneChannel, ProprietaryPlatforms, Proteomics, Software
Version	1.4.0
In Bioconductor since	BioC 3.4 (R-3.3) (1.5 years)
License	GPL-3
Depends	R (>= 3.4.0)
Imports	assertive.base (>= 0.0-7), assertive.files (>= 0.0-2), assertive.numbers (>= 0.0-2), assertive.properties (>= 0.0-4), assertive.sets (>= 0.0-3), assertive.types (>= 0.0-3), Biobase(>= 2.34.0), data.table (>= 1.10.4), dplyr (>= 0.5.0), magrittr (>= 1.5), openxlsx (>= 4.0.17), pathological (>= 0.1-2), reshape2 (>= 1.4.2), stats, stringi (>= 1.1.5), SummarizedExperiment(>= 1.4.0), testthat (>= 1.0.2), tidyr (>= 0.6.2), utils
LinkingTo
Suggests	knitr, MSnbase, rmarkdown, withr
SystemRequirements
Enhances
URL	https://bitbucket.org/graumannlabtools/readat
BugReports	https://bitbucket.org/graumannlabtools/readat/issues
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	readat_1.4.0.tar.gz
Windows Binary	readat_1.4.0.zip
Mac OS X 10.11 (El Capitan)	readat_1.4.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/readat
Package Short Url	http://bioconductor.org/packages/readat/
Package Downloads Report	Download Stats