Bioconductor version: Release (3.6)
The rDGIdb package provides a wrapper for the Drug Gene Interaction Database (DGIdb). For simplicity, the wrapper query function and output resembles the user interface and results format provided on the DGIdb website (http://www.dgidb.org/).
Author: Thomas Thurnherr, Franziska Singer, Daniel J. Stekhoven, and Niko Beerenwinkel
Maintainer: Thomas Thurnherr <thomas.thurnherr at gmail.com>
Citation (from within R,
enter citation("rDGIdb")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("rDGIdb")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("rDGIdb")
R Script | Query DGIdb using R | |
Reference Manual | ||
Text | NEWS | |
Text | LICENSE |
biocViews | Annotation, FunctionalGenomics, Pharmacogenetics, Pharmacogenomics, ResearchField, Software, WorkflowStep |
Version | 1.4.4 |
In Bioconductor since | BioC 3.4 (R-3.3) (1.5 years) |
License | MIT + file LICENSE |
Depends | |
Imports | jsonlite, httr, methods, graphics |
LinkingTo | |
Suggests | BiocStyle, knitr, testthat |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | rDGIdb_1.4.4.tar.gz |
Windows Binary | rDGIdb_1.4.4.zip |
Mac OS X 10.11 (El Capitan) | rDGIdb_1.4.4.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/rDGIdb |
Package Short Url | http://bioconductor.org/packages/rDGIdb/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.6 | Source Archive |
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