miRNAmeConverter

DOI: 10.18129/B9.bioc.miRNAmeConverter    

Convert miRNA Names to Different miRBase Versions

Bioconductor version: Release (3.6)

Package containing an S4 class for translating mature miRNA names to different miRBase versions, sequence retrieval, checking names for validity and detecting miRBase version of a given set of names (data from http://www.mirbase.org/).

Author: Stefan Haunsberger [aut, cre]

Maintainer: Stefan J. Haunsberger <stefan.haunsberger at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("miRNAmeConverter")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("miRNAmeConverter")

 

PDF	R Script	miRNAmeConverter-vignette
PDF		Reference Manual
Text		NEWS

Details

biocViews	Preprocessing, Software, miRNA
Version	1.6.0
In Bioconductor since	BioC 3.3 (R-3.3) (2 years)
License	Artistic-2.0
Depends	miRBaseVersions.db
Imports	DBI, AnnotationDbi
LinkingTo
Suggests	methods, testthat, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	miRNAmeConverter_1.6.0.tar.gz
Windows Binary	miRNAmeConverter_1.6.0.zip
Mac OS X 10.11 (El Capitan)	miRNAmeConverter_1.6.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/miRNAmeConverter
Package Short Url	http://bioconductor.org/packages/miRNAmeConverter/
Package Downloads Report	Download Stats