clusterStab

DOI: 10.18129/B9.bioc.clusterStab    

Compute cluster stability scores for microarray data

Bioconductor version: Release (3.6)

This package can be used to estimate the number of clusters in a set of microarray data, as well as test the stability of these clusters.

Author: James W. MacDonald, Debashis Ghosh, Mark Smolkin

Maintainer: James W. MacDonald <jmacdon at u.washington.edu>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("clusterStab")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("clusterStab")

 

PDF	R Script	clusterStab Overview
PDF		Reference Manual

Details

biocViews	Clustering, Software
Version	1.50.0
In Bioconductor since	BioC 1.7 (R-2.2) (12.5 years)
License	Artistic-2.0
Depends	Biobase(>= 1.4.22), R (>= 1.9.0), methods
Imports
LinkingTo
Suggests	fibroEset, genefilter
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	clusterStab_1.50.0.tar.gz
Windows Binary	clusterStab_1.50.0.zip
Mac OS X 10.11 (El Capitan)	clusterStab_1.50.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/clusterStab
Package Short Url	http://bioconductor.org/packages/clusterStab/
Package Downloads Report	Download Stats