Bioconductor version: Release (3.6)
bioCancer is a Shiny App to visualize and analyse interactively Multi-Assays of Cancer Genomic Data.
Author: Karim Mezhoud [aut, cre]
Maintainer: Karim Mezhoud <kmezhoud at gmail.com>
Citation (from within R,
enter citation("bioCancer")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("bioCancer")
HTML | R Script | bioCancer: Interactive Multi-OMICS Cancers Data Visualization and Analysis |
Reference Manual | ||
Text | NEWS | |
Text | LICENSE |
biocViews | DataRepresentation, GUI, GeneExpression, GeneTarget, MultipleComparison, Network, Pathways, Reactome, Software, Visualization |
Version | 1.6.0 |
In Bioconductor since | BioC 3.4 (R-3.3) (1.5 years) |
License | AGPL-3 | file LICENSE |
Depends | R (>= 3.3.0), radiant.data (>= 0.8.1), cgdsr (>= 1.2.6), XML (>= 3.98) |
Imports | DT (>= 0.2), dplyr (>= 0.7.2), shiny (>= 1.0.5), AlgDesign (>= 1.1.7.3), import (>= 1.1.0), methods, shinythemes, Biobase, geNetClassifier, AnnotationFuncs, org.Hs.eg.db, DOSE, clusterProfiler, reactome.db, ReactomePA, DiagrammeR (>= 0.7), visNetwork, htmlwidgets, plyr, tibble |
LinkingTo | |
Suggests | BiocStyle, rmarkdown, knitr, testthat (>= 0.10.0) |
SystemRequirements | |
Enhances | |
URL | http://kmezhoud.github.io/bioCancer |
BugReports | https://github.com/kmezhoud/bioCancer/issues |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | bioCancer_1.6.0.tar.gz |
Windows Binary | bioCancer_1.6.0.zip |
Mac OS X 10.11 (El Capitan) | bioCancer_1.6.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/bioCancer |
Package Short Url | http://bioconductor.org/packages/bioCancer/ |
Package Downloads Report | Download Stats |
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