Bioconductor version: Release (3.6)
DBChIP detects differentially bound sharp binding sites across multiple conditions, with or without matching control samples.
Author: Kun Liang
Maintainer: Kun Liang <kliang at stat.wisc.edu>
Citation (from within R,
enter citation("DBChIP")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("DBChIP")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("DBChIP")
R Script | DBChIP | |
Reference Manual |
biocViews | ChIPSeq, Genetics, Sequencing, Software, Transcription |
Version | 1.22.0 |
In Bioconductor since | BioC 2.11 (R-2.15) (5.5 years) |
License | GPL (>= 2) |
Depends | R (>= 2.15.0), edgeR, DESeq |
Imports | |
LinkingTo | |
Suggests | ShortRead, BiocGenerics |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | metagene |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | DBChIP_1.22.0.tar.gz |
Windows Binary | DBChIP_1.22.0.zip |
Mac OS X 10.11 (El Capitan) | DBChIP_1.22.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/DBChIP |
Package Short Url | http://bioconductor.org/packages/DBChIP/ |
Package Downloads Report | Download Stats |
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