getFusionByChromosome {chimeraviz} | R Documentation |
Helper function to retrieve the Fusion objects that involves genes in the given chromosome name.
getFusionByChromosome(fusionList, chr)
fusionList |
A list of Fusion objects. |
chr |
The chromosome name we're looking for fusions in. |
A list of Fusion objects.
defuse833ke <- system.file( "extdata", "defuse_833ke_results.filtered.tsv", package="chimeraviz") fusions <- importDefuse(defuse833ke, "hg19", 1) length(getFusionByChromosome(fusions, "chr1")) # [1] 1