lohSpec_stepCalc {GenVisR} | R Documentation |
Calculate avverage LOH within each step
lohSpec_stepCalc(final_dataset, step)
final_dataset |
object of class dataframe with columns 'window_start', 'window_stop', 'chromosome', 'position', 'n_vaf', 't_vaf', 'sample', and 'loh_diff_avg' |
step |
integer with the length of divisions (bp) in chromosomes |
list containing avg loh calculations for each step interval