cnSpec_qual {GenVisR} | R Documentation |
given a data frame construct a plot to display CN information for a group of samples
cnSpec_qual(x, y, genome, CNscale)
x |
object of class data frame containing columns chromosome, start, stop, segmean, sample |
y |
object of class data frame containing user supplied chromosome locations |
genome |
character string specifying a user supplied genome |
CNscale |
Character string specifying if copy number calls supplied are relative (i.e.copy neutral == 0) or absolute (i.e. copy neutral ==2). One of "relative" or "absolute" |
character string specifying input passed quality check