geneViz_extrCDS {GenVisR} | R Documentation |
Extract CDS coordinates within a GRanges object given a transcription database
geneViz_extrCDS(txdb = NULL, gr = NULL, reduce = FALSE, gaps = FALSE)
txdb |
A TxDb object for a genome |
gr |
A Granges object specifying the region of interest |
reduce |
Boolean specifying whether to collapse isoforms |
gaps |
Boolean specifying whether to report space between CDS instead of CDS |
Object of class Granges list