covBars_buildMain {GenVisR}R Documentation

Construct coverage cohort plot

Description

given a data frame construct a plot to display coverage as percentage bars for a group of samples

Usage

covBars_buildMain(data_frame, col, plot_title = NULL, x_lab_size = 12,
  y_lab_size = 12, facet_lab_size = 10, layers = NULL)

Arguments

data_frame

object of class data frame containing columns depth, sample, bp

col

vector of colors for the coverage bars

plot_title

character string for title of plot

x_lab_size

integer specifying the size of the X label

y_lab_size

integer specifying the size of the Y label

facet_lab_size

integer specifying the size of the faceted labels

layers

Additional layers to be plotted, can be a theme but must be a ggplot layer

Value

ggplot object


[Package GenVisR version 1.8.1 Index]