waterfall_geneRecurCutoff {GenVisR}R Documentation

Mutation Recurrence Cutoff

Description

Subset a MAF file keeping only samples that meet a mutation recurrence cutoff

Usage

waterfall_geneRecurCutoff(x, recurrence_cutoff)

Arguments

x

data frame in long format with columns 'gene', 'trv_type', 'sample'

recurrence_cutoff

integer specifying removal of entries not seen in at least "x" percent of samples

Value

a subset data frame


[Package GenVisR version 1.8.1 Index]