geneViz_buildGene {GenVisR}R Documentation

build gene plot

Description

given a data frame with gene feature information build the ggplot2 object

Usage

geneViz_buildGene(data_frame, display_x_axis = TRUE, x_limits = NULL,
  gene_colour = NULL, transcript_name = FALSE, transcript_name_size = 4,
  layers = NULL)

Arguments

data_frame

an object of class data frame specifying gene feature information

display_x_axis

Boolean specifying whether to display X axis coordinate values

x_limits

vector specifying x-axis limits of plot

gene_colour

character specifying colour of gene to be plotted

transcript_name

Boolean specifying whether to plot USCS transcript names

transcript_name_size

Integer specifying the size of the transcript name text

layers

additional ggplot2 layers to plot

Value

ggplot object


[Package GenVisR version 1.8.1 Index]