lolliplot_mutationObs {GenVisR} | R Documentation |
Create a data frame of mutation observations
lolliplot_mutationObs(x, track, fill_value, label_column, rep.fact, rep.dist.lmt, attr.fact, adj.max, adj.lmt, iter.max)
x |
object of class data frame with columns trv_type and amino acid change |
track |
character string specifying one to 'top', 'bottom' to specify proper track |
fill_value |
character string giving the name of the column to shade variants on |
label_column |
character string specifying column containing text information to be plotted |
rep.fact |
repulsive factor for plotted mutations observed track |
rep.dist.lmt |
repulsive distance limit for plotted mutations observed track |
attr.fact |
attraction factor for plotted mutations observed track |
adj.max |
maximum position change for each iteration observed track |
adj.lmt |
position adjustment limit which simulation stops observed track |
iter.max |
maximum iterations beyond which to stop the simulation observed track |
object of class data frame giving mutation observations