geneViz_extrUTR {GenVisR}R Documentation

Extract UTR

Description

Extract UTR coordinates within a GRanges object given a transcription database

Usage

geneViz_extrUTR(txdb = txdb, gr = gr, reduce = FALSE, gaps = FALSE)

Arguments

txdb

A TxDb object for a genome

gr

A Granges object specifying the region of interest

reduce

Boolean specifying whether to collapse isoforms

gaps

Boolean specifying whether to report space between UTR instead of UTR

Value

Object of class Granges list


[Package GenVisR version 1.8.1 Index]