DASC-package |
Detecting hidden batch factors through data adaptive shrinkage and clustering (DASC) |
adj2vector |
Transform the adjacency matrix to a vector |
DASC |
Detecting hidden batch factors through data adaptive shrinkage and clustering (DASC) |
get_father |
Representing node in this subtype |
Ini_SemiNMF |
Initialization of the semi-NMF |
Loss_Fro |
Get the error of Semi-NMF using frobenius norm |
merge |
Combine two trees into one |
Semi_NMF |
Main function of semi-NMF |
Sptree |
Get Spanning tree from adjacency matrix |
stanfordData |
Stanford RNA-Seq dataset |
trans_ADJ |
Outputs Adjacency matrix from the factor vector |
trans_Laplace |
Get Laplace matrix from factor vector |
update_G |
Update G in Semi-NMF |