| dictInfo |
CMdictionary class that stores a Conceptmapper dictionary |
| dictInfo, |
CMdictionary class that stores a Conceptmapper dictionary |
| dictInfo-method |
CMdictionary class that stores a Conceptmapper dictionary |
| dictInfo<- |
CMdictionary class that stores a Conceptmapper dictionary |
| dictInfo<-, |
CMdictionary class that stores a Conceptmapper dictionary |
| dictInfo<--method |
CMdictionary class that stores a Conceptmapper dictionary |
| dictionary |
CMdictionary class that stores a Conceptmapper dictionary |
| dictRef |
CMdictionary class that stores a Conceptmapper dictionary |
| dictRef, |
CMdictionary class that stores a Conceptmapper dictionary |
| dictRef-method |
CMdictionary class that stores a Conceptmapper dictionary |
| dictRef<- |
CMdictionary class that stores a Conceptmapper dictionary |
| dictRef<-, |
CMdictionary class that stores a Conceptmapper dictionary |
| dictRef<--method |
CMdictionary class that stores a Conceptmapper dictionary |
| dictTypes |
CMdictionary class that stores a Conceptmapper dictionary |
| dictTypes, |
CMdictionary class that stores a Conceptmapper dictionary |
| dictTypes-method |
CMdictionary class that stores a Conceptmapper dictionary |
| dict_location |
CMdictionary class that stores a Conceptmapper dictionary |
| dict_location, |
CMdictionary class that stores a Conceptmapper dictionary |
| dict_location-method |
CMdictionary class that stores a Conceptmapper dictionary |
| dict_location<- |
CMdictionary class that stores a Conceptmapper dictionary |
| dict_location<-, |
CMdictionary class that stores a Conceptmapper dictionary |
| dict_location<--method |
CMdictionary class that stores a Conceptmapper dictionary |
| GEOHandler-function |
'connectToGEODB' |
| getGEOMetadata |
'getGEOMetadata' |
| getSRAMetadata |
'getSRAMetadata' |
| groupConfig |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| groupConfig-method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| groupConfig<- |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| groupConfig<--method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| groupsim |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| groupsim-method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| groupwiseConfigRef |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| groupwiseConfigRef-method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| groupwiseConfigRef<- |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| groupwiseConfigRef<--method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| pairwiseConfig |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| pairwiseConfig-method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| pairwiseConfig<- |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| pairwiseConfig<--method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| pairwiseConfigRef |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| pairwiseConfigRef-method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| pairwiseConfigRef<- |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| pairwiseConfigRef<--method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| paramValueIndex |
CMoptions |
| paramValueIndex-method |
CMoptions |
| paramValueIndex<- |
CMoptions |
| paramValueIndex<--method |
CMoptions |
| samplesim |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| samplesim-method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| semanticdifference |
'semanticdifference' |
| show-method |
CMoptions |
| showOpts |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| showOpts-method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| showSimilarities |
'showSimilarities' |
| sim |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| sim, |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| sim-method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| Similarity |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| similarity |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| Similarity-class |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| Similarity-constructor |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| Similarity-method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| similarityInstance |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| similarityInstance-method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| similarityInstance<- |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |
| similarityInstance<--method |
Similarity class to compute similarities between concepts in ontologies and samples annotated with different concepts 'Similarity-class' |